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Metabolites
Microbes
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Filter by:
Host:
Human
All
American dog tick
Birds
Cat
Catfish
Cattle
Chicken
Dog
Ferret
Fox
Freshwater
Goat
Himalayan marmot
Horse
House mouse
Koala
Koalas (marsupials)
Lion
Llama
Mink
Pig
Pigeon
Primates
Rat
Relapsing fever tick
River trout
Sheep
Soil
Turkey
Wood mouse
Biospecimen:
All
Appendix biopsy
Blood
Bronchial brush
Bronichial aspirate
Dental plaque
Digesta
Feces
Feces; Pleural fluid plaque; BAL
Mucosa
Nasal swab
Nasopharyngeal swab
Pleural fluid plaque
Saliva
Saliva; BAL
Sputum
Sputum; BAL
Subgingival plaque
Unknown
Vaginal fluid
Vaginal secretion
Pathogen:
All
Yes
No
Superkingdom:
All
Fungi
Archaea
kingdom
Eukaryota
Virus
Shotokuvirae
Heunggongvirae
Loebvirae
Sangervirae
Trapavirae
Orthornavirae
Pararnavirae
Bamfordvirae
Helvetiavirae
NULL
Metazoa
Phylum:
All
microspora
Actinobacteria
Firmicutes
Proteobacteria
Verrucomicrobia
Bacteroidetes
Ascomycota
Euryarchaeota
Synergistetes
Fusobacteria
Planctomycetes
Spirochaetes
Lentisphaerae
firmicutes
phylum
Deinococcus-Thermus
Fibrobacteres
Thermodesulfobacteria
Chlorobi
Chloroflexi
Tenericutes
Crenarchaeota
Thermotogae
Euglenozoa
Parabasalia
Apicomplexa
Aquificae
Deferribacteres
Calditrichaeota
Ignavibacteriae
Caldiserica
Candidatus Saccharibacteria
Cyanobacteria
Acidobacteria
Chlamydiae
Methanococci
Nanoarchaeota
Thaumarchaeota
Korarchaeota
Elusimicrobia
Nitrospirae
Dictyoglomi
Gemmatimonadetes
Chrysiogenetes
Candidatus Cloacimonetes
Uroviricota
Cossaviricota
Phixviricota
Negarnaviricota
Cressdnaviricota
Basidiomycota
Blastocladiomycota
Chytridiomycota
Cryptomycota
Microsporidia
Mucoromycota
Olpidiomycota
Zoopagomycota
Peploviricota
Taleaviricota
Hofneiviricota
Saleviricota
Duplornaviricota
Kitrinoviricota
Lenarviricota
Pisuviricota
Artverviricota
Nucleocytoviricota
Preplasmiviricota
Dividoviricota
Candidatus Cryosericota
Candidatus Krumholzibacteriota
Coprothermobacterota
Balneolaeota
Candidatus Kapabacteria
Rhodothermaeota
candidate division LCP-89
candidate division Zixibacteria
Candidatus Fermentibacteria
Candidatus Hydrogenedentes
Candidatus Kryptonia
Candidatus Latescibacteria
Candidatus Marinimicrobia
Candidatus Tectomicrobia
Nitrospinae
Candidatus Abyssubacteria
Candidatus Aureabacteria
Candidatus Omnitrophica
Kiritimatiellaeota
Abditibacteriota
Armatimonadetes
Candidatus Dormibacteraeota
Candidatus Eremiobacteraeota
Candidatus Margulisbacteria
Candidatus Melainabacteria
NULL
Calescamantes
candidate division CPR1
candidate division CPR2
candidate division CPR3
candidate division FCPU426
candidate division GAL15
candidate division JL-ETNP-Z39
candidate division KD3-62
candidate division NC10
candidate division WOR-3
candidate division WWE3
Candidatus Abawacabacteria
Candidatus Absconditabacteria
Candidatus Aerophobetes
Candidatus Aminicenantes
Candidatus Atribacteria
Candidatus Berkelbacteria
Candidatus Binatota
Candidatus Bipolaricaulota
Candidatus Blackallbacteria
Candidatus Coatesbacteria
Candidatus Dadabacteria
Candidatus Delongbacteria
Candidatus Desantisbacteria
Candidatus Doudnabacteria
Candidatus Edwardsbacteria
Candidatus Eisenbacteria
Candidatus Fervidibacteria
Candidatus Firestonebacteria
Candidatus Fischerbacteria
Candidatus Fraserbacteria
Candidatus Glassbacteria
Candidatus Goldbacteria
Candidatus Gribaldobacteria
Candidatus Handelsmanbacteria
Candidatus Hydrothermae
Candidatus Lindowbacteria
Candidatus Mcinerneyibacteriota
Candidatus Muirbacteria
Candidatus Peregrinibacteria
Candidatus Poribacteria
Candidatus Pyropristinus
Candidatus Raymondbacteria
Candidatus Riflebacteria
Candidatus Rokubacteria
Candidatus Salinosulfoleibacteria
Candidatus Schekmanbacteria
Candidatus Sumerlaeota
Candidatus Wallbacteria
Candidatus Wirthbacteria
Candidatus Elulimicrobiota
Candidatus Gracilibacteria
Candidatus Amesbacteria
Candidatus Beckwithbacteria
Candidatus Blackburnbacteria
Candidatus Cerribacteria
Candidatus Chisholmbacteria
Candidatus Collierbacteria
Candidatus Curtissbacteria
Candidatus Daviesbacteria
Candidatus Gottesmanbacteria
Candidatus Levybacteria
Candidatus Microgenomates
Candidatus Pacebacteria
Candidatus Roizmanbacteria
Candidatus Shapirobacteria
Candidatus Woesebacteria
Candidatus Woykebacteria
Candidatus Adlerbacteria
Candidatus Andersenbacteria
Candidatus Azambacteria
Candidatus Brennerbacteria
Candidatus Buchananbacteria
Candidatus Campbellbacteria
Candidatus Colwellbacteria
Candidatus Falkowbacteria
Candidatus Giovannonibacteria
Candidatus Harrisonbacteria
Candidatus Jacksonbacteria
Candidatus Jorgensenbacteria
Candidatus Kaiserbacteria
Candidatus Kerfeldbacteria
Candidatus Komeilibacteria
Candidatus Kuenenbacteria
Candidatus Liptonbacteria
Candidatus Lloydbacteria
Candidatus Magasanikbacteria
Candidatus Moranbacteria
Candidatus Nealsonbacteria
Candidatus Niyogibacteria
Candidatus Nomurabacteria
Candidatus Parcubacteria
Candidatus Portnoybacteria
Candidatus Ryanbacteria
Candidatus Spechtbacteria
Candidatus Staskawiczbacteria
Candidatus Sungbacteria
Candidatus Tagabacteria
Candidatus Taylorbacteria
Candidatus Terrybacteria
Candidatus Uhrbacteria
Candidatus Veblenbacteria
Candidatus Vogelbacteria
Candidatus Wildermuthbacteria
Candidatus Wolfebacteria
Candidatus Yanofskybacteria
Candidatus Yonathbacteria
Candidatus Zambryskibacteria
Candidatus Thermoplasmatota
Streptophyta
Platyhelminthes
Nematoda
Ciliophora
Hemichordata
Chlorophyta
Chordata
Annelida
Mollusca
Arthropoda
Oomycota
Fornicata
Evosea
Saccharibacteria_(TM7)
Oxygen Preference:
All
Nanaerobe
Aerobe
Anaerobe
Facultative anaerobe
Facultative
Facultative aerobe
Anaerobic
Microaerophilic
anaerobe
Obligate anaerobe
Aerobe; Facultative anaerobe
aerobe
Aerobic
Microaerophile
Facultatively anaerobe
Aerobe; Anaerobe
Microaerophile/ anaerobe
facultative anaerobe
Facultative anaerobe
Obligate anaerobic
Anaerobe; Microaerophile
Facultative anaerobe; Microaerophile
Obligate aerobic
NA
Facultative anaerobe, air+CO2
Aerobe, microaerophile
Aerotolerant
Energy Production:
All
Chemoorganotroph
Chemoorganotroph
Heterotroph
Lithotroph
Photosynthetic
Chemolithotroph- Methylotroph- Organotroph
Lithotroph
Autotroph
Heterotroph
Obligate chemoautolithotroph
Heterotroph - Chemoorganotroph
Chemolithoautotroph
Heterotroph - Chemoheterotroph
Chemoheterotroph- Heterotroph
Oligotroph
Phototroph
Chemolithoautotroph
Chemosynthetic
Diazotroph
Chemoheterotroph
Chemolithotroph
Photosynthetic - Photolithoautotroph
Photolithotroph
Photoautotroph - Photosynthetic
Photosynthetic - Photoautotroph
Phototroph - Photosynthetic
Photosynthetic - Photolithotroph
Heterotroph - Chemoautotroph
Heterotroph - Chemolithoautotroph
Phototroph - Autotroph
Chemolithotroph
Organoheterotroph
Lithoautotroph
Autotroph
Organotroph
Organotroph
Chemoorganoheterotroph
Chemoorganotroph - Chemolithotroph
Methylotroph
Phototroph - Heterotroph
Lithotroph - Lithotroph
Lithotroph - Autotroph
Lithotroph - Chemolithoautotroph
Methylotroph
Autotroph - Lithoautotroph - Lithotroph
Phototroph - Methylotroph
Methanotroph
Chemoautotroph
Lithoautotroph - Chemolithoautotroph
Chemolithotroph - Autotroph
Chemolithotroph- Autotroph
Chemolithotroph- Lithotroph- Oligotroph
Oligotroph- Lithotroph
Chemolithoautotroph - Autotroph
Autotroph - Methanotroph
Chemoorganoheterotroph- Lithoheterotroph- Organotroph
Organotroph - Chemolithotroph - Autotroph
Heterotroph - Heterotroph
Photoheterotroph
Photolithoautotroph
Phototroph
Photolithotroph - Photoautotroph
Photosynthetic - Phototroph
Oligotroph - Heterotroph
Heterotroph - Chemolithotroph
Photosynthetic- Photoautotroph
Chemotroph
Chemoheterotroph
Heterotroph- Chemolithoautotroph
Lithotroph - Chemolithotroph
Mixotroph
Gram Stain:
All
Positive
Negative
Cell shape:
All
Bacilli
Cocci
Spirilla
Filamentous
Tailed
SquareShaped
CurvedShaped
NA
Cell arrangement:
All
Pairs - Singles
Pairs
Singles - Chains
Singles
Singles-Pairs
Chains - Pairs - Singles
Clusters - Pairs - Singles
Clusters-Pairs-Singles
Chains - Singles
Chains-Singles
Pairs-Singles-Chains
Chains-Pairs-Singles
Pairs - Singles - Chains
Singles - Pairs - Chains
Pairs-Singles
Pairs - Chains
Chains-Pairs
Chains - Pairs
Chains
Filaments - Singles
Chains - Clusters - Singles
Pairs - Chains - Singles
Filaments
Singles - V-shaped forms
Pairs-Singles- Clusters
Clusters - Singles
Pairs - Tetrads
Chains - Singles - Pairs
Singles - Pairs
Clusters
Singles - Clusters
Singles - Tetrads
Tetrads
Chains - Filaments
Singles - Chains - Pairs
Filaments-Pairs
Singles - Pairs - Clusters
Clusters - Singles - Pairs
Clusters-Singles
Chains - Clusters - Pairs - Singles
Clusters
Pairs-Chains
Filaments - Pairs - Singles
Irregular colonies-Singles
Clusters - Filaments - Singles
Clear
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Displaying microbes
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Microbe ID
Organism
Superkindgom
Kingdom
Phylum
Oxygen Preference
Energy Production
Host & Biospecimen
Pathogenicity Status
MMDBm0000002
Micromonospora aurantiaca ATCC 27029
Bacteria
Eubacteria
Actinobacteria
Aerobe
Polyisoprene rubber degrader
Human Feces
Non-pathogenic
MMDBm0000003
Acidaminococcus fermentans DSM 20731
Bacteria
Eubacteria
Firmicutes
Anaerobe
Not Available
Pig
Pathogenic
MMDBm0000004
Acidaminococcus intestini RyC-MR95
Bacteria
Eubacteria
Firmicutes
Anaerobe
Asaccharolytic, glutamate is fermented
Human Feces
Pathogenic
MMDBm0000006
Acinetobacter baumannii
Bacteria
Eubacteria
Proteobacteria
Not Available
Not Available
Human
Pathogenic
MMDBm0000007
Acinetobacter pittii ANC 4052
Bacteria
Eubacteria
Proteobacteria
Aerobe
Asaccharolytic
Human Feces
Non-pathogenic
MMDBm0000008
Acinetobacter radioresistens NIPH 2130
Bacteria
Eubacteria
Proteobacteria
Aerobe
Asaccharolytic
Human Feces
Non-pathogenic
MMDBm0000009
Adlercreutzia equolifaciens DSM 19450
Bacteria
Eubacteria
Actinobacteria
Anaerobe
Asaccharolytic, nonfermentative
Human Feces
Pathogenic
MMDBm0000010
Aeromonas jandaei Riv2
Bacteria
Eubacteria
Proteobacteria
Facultative anaerobe
Saccharolytic, fermentative
Human Feces
Non-pathogenic
MMDBm0000011
Aggregatibacter aphrophilus NJ8700
Bacteria
Eubacteria
Proteobacteria
Facultative
Respiratory
Human
Non-pathogenic
MMDBm0000012
Agrobacterium tumefaciens F2
Bacteria
Eubacteria
Proteobacteria
Aerobe
Respiratory
Human Feces
Non-pathogenic
MMDBm0000014
Akkermansia muciniphila
Bacteria
Eubacteria
Verrucomicrobia
Anaerobe
Not Available
Human Feces
Pathogenic
MMDBm0000015
Akkermansia muciniphila ATCC BAA-835
Bacteria
Eubacteria
Verrucomicrobia
Anaerobe
Saccharolytic, fermentative
Human
Pathogenic
MMDBm0000016
Alcaligenes faecalis subsp. faecalis NBRC 13111
Bacteria
Eubacteria
Proteobacteria
Aerobe
Respiratory
Human Feces
Non-pathogenic
MMDBm0000018
Alistipes finegoldii DSM 17242
Bacteria
Eubacteria
Bacteroidetes
Anaerobe
Saccharolytic, fermentative
Human Feces
Pathogenic
MMDBm0000019
Alistipes shahii WAL 8301
Bacteria
Eubacteria
Bacteroidetes
Anaerobe
Saccharolytic, fermentative
Human Feces
Pathogenic
MMDBm0000020
Anaerococcus prevotii DSM 20548
Bacteria
Eubacteria
Firmicutes
Anaerobe
Not Available
Human
Pathogenic
MMDBm0000021
Anaerostipes caccae
Bacteria
Eubacteria
Firmicutes
Anaerobe
Not Available
Human Feces
Pathogenic
MMDBm0000022
Anaerostipes hadrus
Bacteria
Eubacteria
Firmicutes
Anaerobe
Not Available
Human Feces
Pathogenic
MMDBm0000023
Arcobacter butzleri RM4018
Bacteria
Eubacteria
Proteobacteria
Aerobe
Non-fermentative, asaccharolytic
Human
Non-pathogenic
MMDBm0000024
Bacillus altitudinis 41KF2b
Bacteria
Eubacteria
Firmicutes
Facultative anaerobe
Respiration or fermentation of carbohydrates and central metabolism intermediates
Human Feces
Non-pathogenic
MMDBm0000025
Bacillus amyloliquefaciens subsp. amyloliquefaciens DC-12
Bacteria
Eubacteria
Firmicutes
Aerobe
Respiration or fermentation of carbohydrates and central metabolism intermediates
Human Feces
Non-pathogenic
MMDBm0000026
Bacillus cereus AH187 (F4810/72)
Bacteria
Eubacteria
Firmicutes
Aerobe
Respiration or fermentation of carbohydrates and central metabolism intermediates
Human
Non-pathogenic
MMDBm0000028
Bacillus halodurans C-125
Bacteria
Eubacteria
Firmicutes
Facultative aerobe
Respiration or fermentation of carbohydrates and central metabolism intermediates
Human Feces
Non-pathogenic
MMDBm0000030
Bacillus pseudofirmus OF4
Bacteria
Eubacteria
Firmicutes
Facultative aerobe
Respiration or fermentation of carbohydrates and central metabolism intermediates
Human Feces
Non-pathogenic
MMDBm0000031
Bacillus subtilis
Bacteria
Eubacteria
Firmicutes
Facultative aerobe
Not Available
Human
Pathogenic
Displaying microbes
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1904
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