| MMDBm0000018 | Alistipes finegoldii DSM 17242 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000019 | Alistipes shahii WAL 8301 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000039 | Bacteroides clarus YIT 12056 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000044 | Bacteroides fragilis 3_1_12 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000045 | Bacteroides fragilis 638R | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000046 | Bacteroides fragilis NCTC 9343 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000047 | Bacteroides fragilis YCH46 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000049 | Bacteroides ovatus | Not Available | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000052 | Bacteroides stercoris | Not Available | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000053 | Bacteroides stercoris ATCC 43183 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000054 | Bacteroides thetaiotaomicron | Not Available | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000055 | Bacteroides thetaiotaomicron VPI-5482 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000057 | Bacteroides vulgatus ATCC 8482 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000058 | Bacteroides xylanisolvens XB1A | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000148 | Dysgonomonas gadei ATCC BAA-286 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000223 | Odoribacter splanchnicus DSM 20712 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000232 | Parabacteroides distasonis ATCC 8503 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000233 | Parabacteroides goldsteinii dnLKV18 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000241 | Porphyromonas asaccharolytica DSM 20707 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000242 | Porphyromonas endodontalis ATCC 35406 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000246 | Prevotella intermedia | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000247 | Prevotella intermedia 17 | Not Available | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000249 | Prevotella ruminicola 23 | Not Available | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000323 | Elizabethkingia meningoseptica | Not Available | Bacteroidetes | Human | Microbial culture | Not Available |
| MMDBm0000324 | Empedobacter brevis | Not Available | Bacteroidetes | Human Bronichial aspirate | Microbial culture | Not Available |
