| MMDBm0000010 | Aeromonas jandaei Riv2 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000012 | Agrobacterium tumefaciens F2 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000095 | Bradyrhizobium elkanii USDA 76 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000105 | Citrobacter freundii ATCC 8090 = MTCC 1658 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000160 | Escherichia coli | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000194 | Klebsiella aerogenes KCTC 2190 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000221 | Ochrobactrum anthropi ATCC 49188 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000222 | Ochrobactrum intermedium LMG 3301 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000288 | Vibrio mimicus MB-451 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000337 | Ralstonia pickettii | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000361 | Zymomonas mobilis | Not Available | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000371 | Aeromonas salmonicida | Not Available | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000750 | Actinobacillus succinogenes | Not Available | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000890 | Parvularcula bermudensis | Not Available | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0001066 | Klebsiella pneumoniae | Not Available | Proteobacteria | Human | Microbial culture | Not Available |
| MMDBm0001067 | Klebsiella variicola | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001198 | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001199 | Aeromonas veronii B565 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001450 | Citrobacter koseri ATCC BAA-895 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001501 | Cronobacter sakazakii ATCC BAA-894 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001574 | Enterobacter asburiae LF7a | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001593 | Escherichia coli SE11 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001596 | Escherichia fergusonii ATCC 35469 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001858 | Methylobacterium radiotolerans JCM 2831 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001859 | Methylobacterium populi BJ001 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
