| MMDBm0000024 | Bacillus altitudinis 41KF2b | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000025 | Bacillus amyloliquefaciens subsp. amyloliquefaciens DC-12 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000026 | Bacillus cereus AH187 (F4810/72) | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000032 | Bacillus timonensis 10403023 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000033 | Bacillus vallismortis DV1-F-3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000096 | Brevibacillus borstelensis AK1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000173 | Eubacterium rectale ATCC 33656 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000207 | Lactobacillus reuteri | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000226 | Paenibacillus alvei DSM 29 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000227 | Paenibacillus barengoltzii G22 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000228 | Paenibacillus daejeonensis DSM 15491 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000287 | Veillonella parvula DSM 2008 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000389 | Syntrophomonas wolfei | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000633 | Staphylococcus capitis | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000688 | Enterococcus saccharolyticus | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001035 | Bacillus cereus | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001077 | Paraclostridium bifermentans | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0001148 | Erysipelotrichaceae bacterium 2_2_44A | Not Available | Firmicutes | Not Available | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001248 | Bacillus subtilis subsp. subtilis str. 168 | Not Available | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001264 | Bacillus cereus G9842 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001269 | Bacillus megaterium DSM 319 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001734 | Lactobacillus plantarum WCFS1 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001736 | Lactobacillus salivarius UCC118 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001745 | Lactobacillus helveticus DPC 4571 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001747 | Lactobacillus fermentum IFO 3956 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
