| MMDBm0000116 | Clostridium beijerinckii NCIMB 8052 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000125 | Clostridium clostridioforme CM201 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000132 | Clostridium perfringens ATCC 13124 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000136 | Clostridium saccharoperbutylacetonicum N1-4(HMT) | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000147 | Dorea formicigenerans ATCC 27755 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000172 | Eubacterium limosum KIST612 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000181 | Faecalibacterium prausnitzii SL3/3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000207 | Lactobacillus reuteri | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000269 | Stoquefichus massiliensis AP9 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000472 | Clostridium butyricum | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000492 | Lactobacillus buchneri | Not Available | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0000619 | Thermoanaerobacterium saccharolyticum | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000666 | Terrisporobacter glycolicus | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000674 | Anaerobutyricum hallii | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000793 | Clostridium hiranonis | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001052 | Clostridium saccharoperbutylacetonicum | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001104 | Eubacterium hallii | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001105 | Ruminococcus callidus | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001740 | Lactobacillus brevis ATCC 367 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001761 | Lactobacillus reuteri SD2112 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001784 | Listeria monocytogenes serotype 4b str. F2365 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0730891 | Bacillus thermoamylovorans | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0766572 | Listeria monocytogenes Finland 1998 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0766585 | Listeria monocytogenes FSL R2-561 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
