| MMDBm0000105 | Citrobacter freundii ATCC 8090 = MTCC 1658 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000306 | Pelobacter carbinolicus | Not Available | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000620 | Salmonella enterica | Not Available | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0001067 | Klebsiella variicola | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001191 | Actinobacillus pleuropneumoniae serovar 5b str. L20 | Not Available | Proteobacteria | Pig | Metabolic reconstruction | VMH |
| MMDBm0001450 | Citrobacter koseri ATCC BAA-895 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001596 | Escherichia fergusonii ATCC 35469 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001727 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002232 | Shigella flexneri 2002017 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002492 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002531 | Shigella sonnei Ss046 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002532 | Shigella dysenteriae Sd197 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002781 | Yersinia enterocolitica subsp. enterocolitica 8081 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0519667 | Anaerobiospirillum succiniciproducens | Not Available | Proteobacteria | Not Available | Metabolic reconstruction | VMH |
| MMDBm0519668 | Anaerobiospirillum succiniciproducens DSM 6400 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533093 | Leminorella grimontii ATCC 33999 = DSM 5078 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533412 | Citrobacter amalonaticus Y19 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533435 | Citrobacter freundii UCI 31 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533439 | Citrobacter portucalensis | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533444 | Citrobacter youngae ATCC 29220 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0534735 | Enterobacter cloacae EcWSU1 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0540120 | Escherichia albertii KF1 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0540122 | Escherichia albertii TW07627 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0544444 | Klebsiella michiganensis KCTC 1686 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0544527 | Klebsiella pneumoniae BIDMC 31 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
