| MMDBm0000025 | Bacillus amyloliquefaciens subsp. amyloliquefaciens DC-12 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000028 | Bacillus halodurans C-125 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000032 | Bacillus timonensis 10403023 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000033 | Bacillus vallismortis DV1-F-3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000096 | Brevibacillus borstelensis AK1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000097 | Brevibacillus brevis NBRC 100599 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000112 | Clostridioides difficile R20291 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000120 | Clostridium botulinum A str. ATCC 19397 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000121 | Clostridium botulinum Bf | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000122 | Clostridium botulinum F str. 230613 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000227 | Paenibacillus barengoltzii G22 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001113 | Holdemania | Not Available | Firmicutes | Not Available | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001146 | Clostridiales bacterium 1_7_47FAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001248 | Bacillus subtilis subsp. subtilis str. 168 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001257 | Bacillus clausii KSM-K16 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001269 | Bacillus megaterium DSM 319 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001274 | Bacillus amyloliquefaciens DSM 7 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001459 | Clostridium botulinum A str. ATCC 3502 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001460 | Clostridium botulinum A str. Hall | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001470 | Clostridium difficile CD196 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001473 | Clostridium sticklandii DSM 519 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001734 | Lactobacillus plantarum WCFS1 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001751 | Lactobacillus plantarum JDM1 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001794 | Lysinibacillus sphaericus C3-41 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002216 | Lactococcus garvieae ATCC 49156 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
