MiMeDB: Showing metabocard for Alpha-Farnesene (MMDBc0004248)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 22:19:09 UTC

Update Date

2022-08-31 06:22:06 UTC

MiMeDB ID

MMDBc0004248

Metabolite Identification

Common Name

Alpha-Farnesene

Description

alpha-Farnesene belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. (3E,6E)-alpha-Farnesene, also known as trans-alpha-Farnesene, is a sweet, bergamot, and citrus tasting flavouring ingredient. (3E,6E)-alpha-Farnesene is a constituent of the natural coating of apples and pears and other fruit. It has been identified in gingers, cottonseeds, common oregano, sweet oranges, spearmints, guava, pomes, and pears. This could make (3E,6E)-alpha-farnesene a potential biomarker for the consumption of these foods.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Not Available

Chemical Formula

C₁₅H₂₄

Average Molecular Weight

204.3511

Monoisotopic Molecular Weight

204.187800768

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

InChI=1S/C15H24/c1-6-14(4)10-8-12-15(5)11-7-9-13(2)3/h6,9-10,12H,1,7-8,11H2,2-5H3/b14-10+,15-12+

InChI Key

CXENHBSYCFFKJS-VDQVFBMKSA-N

Chemical Taxonomy

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Fungi	Ascomycota	4	Human Feces	Metabolic reconstruction; ; Unknown
Fungi	Basidiomycota	8	Human Feces

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details
Plant	Fruit	Citrus sinensis	FooDB	31437929	details
Plant	Plant	Chamaemelum nobile	FooDB	31437929	details
Plant	Essential oil	Gossypium	FooDB	31437929	details
Plant		Malus	FooDB	31437929	details
Plant	Plant	Matricaria recutita	FooDB	31437929	details
Plant		Zingiber officinale	FooDB	31437929	details
Plant	Fruit	Citrus reticulata	FooDB	31437929	details
Plant	Leaves		FooDB	31437929	details
Plant	Leaves		FooDB	31437929	details
Plant	Plant	Annona squamosa	FooDB	31437929	details
Plant	Fruit	Pyrus communis	FooDB	31437929	details
Plant	Essential oil	Zingiber officinale	FooDB	31437929	details
Plant	Leaves		FooDB	31437929	details
Plant	Fruit	Psidium guajava	FooDB	31437929	details
Plant	Plant	Origanum vulgare	FooDB	31437929	details
Plant	Rhizome	Zingiber officinale	FooDB	31437929	details
Plant	Root	Daucus carota ssp. sativus	FooDB	31437929	details
Plant	Essential oil	Mentha spicata	FooDB	31437929	details
Plant	Essential oil	Citrus limon	FooDB	31437929	details
Plant	Leaves	Camellia sinensis	FooDB	31437929	details
Plant	Pericarp	Malus pumila	FooDB	31437929	details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

Not Available

References

Synthesis Reference

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. doi: 10.1038/35036052. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. doi: 10.1194/jlr.R600022-JLR200. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. doi: 10.1194/jlr.R700005-JLR200. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
Yannai, Shmuel (2004). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. Boca Raton: Chapman & Hall/CRC..
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Alpha-Farnesene (MMDBc0004248)

MOL for #<Metabolite:0x000055b76c6218c0>

3D MOL for #<Metabolite:0x000055b76c6218c0>

3D SDF for #<Metabolite:0x000055b76c6218c0>

3D-SDF for #<Metabolite:0x000055b76c6218c0>

PDB for #<Metabolite:0x000055b76c6218c0>

3D PDB for #<Metabolite:0x000055b76c6218c0>

SMILES for #<Metabolite:0x000055b76c6218c0>

INCHI for #<Metabolite:0x000055b76c6218c0>

Structure for #<Metabolite:0x000055b76c6218c0>

3D Structure for #<Metabolite:0x000055b76c6218c0>