MiMeDB: Showing metabocard for (-)-(R)-11-dehydrosydonic acid (MMDBc0011260)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 03:11:06 UTC

Update Date

2022-08-31 06:32:48 UTC

MiMeDB ID

MMDBc0011260

Metabolite Identification

Common Name

(-)-(R)-11-dehydrosydonic acid

Description

(-)-(R)-11-dehydrosydonic acid belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. Based on a literature review very few articles have been published on (-)-(R)-11-dehydrosydonic acid.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
(-)-(R)-11-Dehydrosydonate	Generator

Chemical Formula

C₁₅H₂₀O₄

Average Molecular Weight

264.321

Monoisotopic Molecular Weight

264.136159124

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

InChI=1S/C15H20O4/c1-10(2)5-4-8-15(3,19)12-7-6-11(14(17)18)9-13(12)16/h6-7,9,16,19H,1,4-5,8H2,2-3H3,(H,17,18)/t15-/m1/s1

InChI Key

CUAGAFVIRMPUAL-OAHLLOKOSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Sesquiterpenoids

Alternative Parents

Substituents

Bisabolane sesquiterpenoid
Sesquiterpenoid
Hydroxybenzoic acid
Benzoic acid
Benzoic acid or derivatives
Benzoyl
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenol
Benzenoid
Monocyclic benzene moiety
Tertiary alcohol
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Aromatic alcohol
Organooxygen compound
Alcohol
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Fungi	Ascomycota	2	Human Feces	Metabolic reconstruction;

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78441147

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139586105

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for (-)-(R)-11-dehydrosydonic acid (MMDBc0011260)

MOL for #<Metabolite:0x000055b76defaf90>

3D MOL for #<Metabolite:0x000055b76defaf90>

3D SDF for #<Metabolite:0x000055b76defaf90>

3D-SDF for #<Metabolite:0x000055b76defaf90>

PDB for #<Metabolite:0x000055b76defaf90>

3D PDB for #<Metabolite:0x000055b76defaf90>

SMILES for #<Metabolite:0x000055b76defaf90>

INCHI for #<Metabolite:0x000055b76defaf90>

Structure for #<Metabolite:0x000055b76defaf90>

3D Structure for #<Metabolite:0x000055b76defaf90>