MiMeDB: Showing metabocard for Metagenetriindole A (MMDBc0014793)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 05:45:19 UTC

Update Date

2022-08-31 06:38:13 UTC

Metabolite ID

MMDBc0014793

Metabolite Identification

Common Name

Metagenetriindole A

Description

Metagenetriindole A belongs to the class of organic compounds known as 3-alkylindoles. 3-alkylindoles are compounds containing an indole moiety that carries an alkyl chain at the 3-position. Based on a literature review very few articles have been published on Metagenetriindole A.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152107452D          

 30 35  0  0  0  0            999 V2000
   -2.3917   -1.1402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6011   -0.1550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3917   -1.9652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9367    0.5987    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6772   -0.7277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7806   -0.2412    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    0.6979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6772   -2.3777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4517    1.2661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3068   -1.5527    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3037    1.3194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538    1.5229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9628   -1.1402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2957    0.4262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1781   -0.8853    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4752    0.5124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    0.8555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9628   -1.9652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6313    1.1799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0768   -0.1006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8838    0.0709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1781   -2.2201    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0182    1.7319    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    2.1904    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4358   -0.5422    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  1  2  0  0  0  0
  5  2  2  0  0  0  0
  6  3  2  0  0  0  0
  7  1  1  0  0  0  0
  8  2  1  0  0  0  0
  9  3  1  0  0  0  0
 10  4  1  0  0  0  0
 11  5  1  0  0  0  0
 12  6  1  0  0  0  0
 16  7  2  0  0  0  0
 17  8  2  0  0  0  0
 18  9  2  0  0  0  0
 19 13  2  0  0  0  0
 19 16  1  0  0  0  0
 20 14  2  0  0  0  0
 20 17  1  0  0  0  0
 21 15  2  0  0  0  0
 21 18  1  0  0  0  0
 22 10  2  0  0  0  0
 22 16  1  0  0  0  0
 23 11  2  0  0  0  0
 23 17  1  0  0  0  0
 24 12  2  0  0  0  0
 24 18  1  0  0  0  0
 25 19  1  0  0  0  0
 25 20  1  0  0  0  0
 26 21  1  0  0  0  0
 26 25  1  0  0  0  0
 27 13  1  0  0  0  0
 27 22  1  0  0  0  0
 28 14  1  0  0  0  0
 28 23  1  0  0  0  0
 29 15  1  0  0  0  0
 29 24  1  0  0  0  0
 30 26  2  0  0  0  0
M  END


  Mrv1652305152107452D          

 30 35  0  0  0  0            999 V2000
   -2.3917   -1.1402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6011   -0.1550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3917   -1.9652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9367    0.5987    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3523    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6772   -0.7277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7806   -0.2412    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    0.6979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6772   -2.3777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4517    1.2661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6378    2.3479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3068   -1.5527    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3037    1.3194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538    1.5229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9628   -1.1402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2957    0.4262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1781   -0.8853    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4752    0.5124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    0.8555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9628   -1.9652    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6313    1.1799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9233    1.9354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0768   -0.1006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8838    0.0709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1781   -2.2201    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0182    1.7319    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1387    2.1904    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4358   -0.5422    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  1  2  0  0  0  0
  5  2  2  0  0  0  0
  6  3  2  0  0  0  0
  7  1  1  0  0  0  0
  8  2  1  0  0  0  0
  9  3  1  0  0  0  0
 10  4  1  0  0  0  0
 11  5  1  0  0  0  0
 12  6  1  0  0  0  0
 16  7  2  0  0  0  0
 17  8  2  0  0  0  0
 18  9  2  0  0  0  0
 19 13  2  0  0  0  0
 19 16  1  0  0  0  0
 20 14  2  0  0  0  0
 20 17  1  0  0  0  0
 21 15  2  0  0  0  0
 21 18  1  0  0  0  0
 22 10  2  0  0  0  0
 22 16  1  0  0  0  0
 23 11  2  0  0  0  0
 23 17  1  0  0  0  0
 24 12  2  0  0  0  0
 24 18  1  0  0  0  0
 25 19  1  0  0  0  0
 25 20  1  0  0  0  0
 26 21  1  0  0  0  0
 26 25  1  0  0  0  0
 27 13  1  0  0  0  0
 27 22  1  0  0  0  0
 28 14  1  0  0  0  0
 28 23  1  0  0  0  0
 29 15  1  0  0  0  0
 29 24  1  0  0  0  0
 30 26  2  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0014793

> <DATABASE_NAME>
MIME

> <SMILES>
O=C(C(C1=CNC2=CC=CC=C12)C1=CNC2=CC=CC=C12)C1=CNC2=CC=CC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C26H19N3O/c30-26(21-15-29-24-12-6-3-9-18(21)24)25(19-13-27-22-10-4-1-7-16(19)22)20-14-28-23-11-5-2-8-17(20)23/h1-15,25,27-29H

> <INCHI_KEY>
VKPHFVAPGSILPE-UHFFFAOYSA-N

> <FORMULA>
C26H19N3O

> <MOLECULAR_WEIGHT>
389.458

> <EXACT_MASS>
389.152812244

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
42.83796635238292

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
1,2,2-tris(1H-indol-3-yl)ethan-1-one

> <ALOGPS_LOGP>
5.33

> <JCHEM_LOGP>
5.338309384333334

> <ALOGPS_LOGS>
-6.27

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.676180827763641

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.203585533567338

> <JCHEM_PKA_STRONGEST_BASIC>
-7.807102155393963

> <JCHEM_POLAR_SURFACE_AREA>
64.44

> <JCHEM_REFRACTIVITY>
119.1117

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.11e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1,2,2-tris(1H-indol-3-yl)ethanone

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      -4.464  -2.128   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.855  -0.289   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.258   2.073   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -4.464  -3.668   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.482   1.118   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.258   3.613   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.131  -1.358   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.324  -0.450   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.924   1.303   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.131  -4.438   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -4.577   2.363   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.924   4.383   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.573  -2.898   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.567   2.463   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.220   2.843   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.797  -2.128   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -2.419   0.796   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.590   2.073   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.333  -1.652   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.887   0.957   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.126   1.597   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.797  -3.668   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.045   2.202   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.590   3.613   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.143  -0.188   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.650   0.132   0.000  0.00  0.00           C+0
HETATM   27  N   UNK     0      -0.333  -4.144   0.000  0.00  0.00           N+0
HETATM   28  N   UNK     0      -1.901   3.233   0.000  0.00  0.00           N+0
HETATM   29  N   UNK     0       2.126   4.089   0.000  0.00  0.00           N+0
HETATM   30  O   UNK     0       2.680  -1.012   0.000  0.00  0.00           O+0
CONECT    1    4    7                                                       
CONECT    2    5    8                                                       
CONECT    3    6    9                                                       
CONECT    4    1   10                                                       
CONECT    5    2   11                                                       
CONECT    6    3   12                                                       
CONECT    7    1   16                                                       
CONECT    8    2   17                                                       
CONECT    9    3   18                                                       
CONECT   10    4   22                                                       
CONECT   11    5   23                                                       
CONECT   12    6   24                                                       
CONECT   13   19   27                                                       
CONECT   14   20   28                                                       
CONECT   15   21   29                                                       
CONECT   16    7   19   22                                                  
CONECT   17    8   20   23                                                  
CONECT   18    9   21   24                                                  
CONECT   19   13   16   25                                                  
CONECT   20   14   17   25                                                  
CONECT   21   15   18   26                                                  
CONECT   22   10   16   27                                                  
CONECT   23   11   17   28                                                  
CONECT   24   12   18   29                                                  
CONECT   25   19   20   26                                                  
CONECT   26   21   25   30                                                  
CONECT   27   13   22                                                       
CONECT   28   14   23                                                       
CONECT   29   15   24                                                       
CONECT   30   26                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   70    0
END

Synonyms

Not Available

Molecular Formula

C₂₆H₁₉N₃O

Average Mass

389.458

Monoisotopic Mass

389.152812244

IUPAC Name

1,2,2-tris(1H-indol-3-yl)ethan-1-one

Traditional Name

1,2,2-tris(1H-indol-3-yl)ethanone

CAS Registry Number

Not Available

SMILES

O=C(C(C1=CNC2=CC=CC=C12)C1=CNC2=CC=CC=C12)C1=CNC2=CC=CC=C12

InChI Identifier

InChI=1S/C26H19N3O/c30-26(21-15-29-24-12-6-3-9-18(21)24)25(19-13-27-22-10-4-1-7-16(19)22)20-14-28-23-11-5-2-8-17(20)23/h1-15,25,27-29H

InChI Key

VKPHFVAPGSILPE-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 3-alkylindoles. 3-Alkylindoles are compounds containing an indole moiety that carries an alkyl chain at the 3-position.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Indoles

Direct Parent

3-alkylindoles

Alternative Parents

Substituents

3-alkylindole
Aryl alkyl ketone
Aryl ketone
Benzenoid
Substituted pyrrole
Heteroaromatic compound
Vinylogous amide
Pyrrole
Ketone
Azacycle
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.00021 g/L	ALOGPS
logP	5.33	ALOGPS
logP	5.34	ChemAxon
logS	-6.3	ALOGPS
pKa (Strongest Acidic)	13.2	ChemAxon
pKa (Strongest Basic)	-7.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	64.44 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	119.11 m³·mol⁻¹	ChemAxon
Polarizability	42.84 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	1	Human ; Human feces; Human feces; pleural fluid plaque; bal	Metabolic reconstruction

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78435695

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

54769278

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Metagenetriindole A (MMDBc0014793)

MOL for #<Metabolite:0x0000560be1b68738>

3D MOL for #<Metabolite:0x0000560be1b68738>

3D SDF for #<Metabolite:0x0000560be1b68738>

3D-SDF for #<Metabolite:0x0000560be1b68738>

PDB for #<Metabolite:0x0000560be1b68738>

3D PDB for #<Metabolite:0x0000560be1b68738>

SMILES for #<Metabolite:0x0000560be1b68738>

INCHI for #<Metabolite:0x0000560be1b68738>

Structure for #<Metabolite:0x0000560be1b68738>

3D Structure for #<Metabolite:0x0000560be1b68738>