MiMeDB: Showing metabocard for Pederin (MMDBc0020399)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 10:25:26 UTC

Update Date

2022-08-31 06:46:46 UTC

MiMeDB ID

MMDBc0020399

Metabolite Identification

Common Name

Pederin

Description

Structure

MOL SDF PDB SMILES InChI

Synonyms

Not Available

Chemical Formula

C₂₅H₄₅NO₉

Average Molecular Weight

503.633

Monoisotopic Molecular Weight

503.309432033

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

InChI=1S/C25H45NO9/c1-14-12-25(33-9,35-16(3)15(14)2)21(28)22(29)26-23(32-8)18-11-19(27)24(4,5)20(34-18)10-17(31-7)13-30-6/h15-21,23,27-28H,1,10-13H2,2-9H3,(H,26,29)/t15-,16-,17+,18+,19-,20-,21-,23+,25-/m1/s1

InChI Key

ZNEZZONMADKYTB-VRCUBXEUSA-N

Chemical Taxonomy

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
	Proteobacteria	1	Human	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Pederin (MMDBc0020399)

MOL for #<Metabolite:0x000055b76db42998>

3D MOL for #<Metabolite:0x000055b76db42998>

3D SDF for #<Metabolite:0x000055b76db42998>

3D-SDF for #<Metabolite:0x000055b76db42998>

PDB for #<Metabolite:0x000055b76db42998>

3D PDB for #<Metabolite:0x000055b76db42998>

SMILES for #<Metabolite:0x000055b76db42998>

INCHI for #<Metabolite:0x000055b76db42998>

Structure for #<Metabolite:0x000055b76db42998>

3D Structure for #<Metabolite:0x000055b76db42998>