MiMeDB: Showing metabocard for Undecaprenyl diphosphate (MMDBc0029656)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-17 23:36:20 UTC

Update Date

2022-08-31 14:16:41 UTC

Metabolite ID

MMDBc0029656

Metabolite Identification

Common Name

Undecaprenyl diphosphate

Description

Undecaprenyl diphosphate belongs to the class of Polyprenyl Phosphates. These are prenol lipids in which the phosphate group is linked to one end of the polyprenol moiety. (inferred from compound structure)C55-isoprenyl pyrophosphate (undecaprenyl pyrophosphate) is an essential molecule involved in construction of the bacterial peptidoglycan cell wall. (WikiPedia)

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
Diphosphoric acid, mono(3,7,11,15,19,23,27,31,35,39,43-undecamethyl-2,6,10,14,18,22,26,30,34,38,42-tetratetracontaundecaenyl) ester	ChEBI
Undecaprenyl pyrophosphate	ChEBI
UndPP	ChEBI
Diphosphate, mono(3,7,11,15,19,23,27,31,35,39,43-undecamethyl-2,6,10,14,18,22,26,30,34,38,42-tetratetracontaundecaenyl) ester	Generator
Undecaprenyl pyrophosphoric acid	Generator
Undecaprenyl diphosphoric acid	Generator
Bactoprenyl pyrophosphate	HMDB
Diphosphoric acid mono(3,7,11,15,19,23,27,31,35,39,43-undecamethyl-2,6,10,14,18,22,26,30,34,38,42-tetratetracontaundecaenyl) ester	HMDB
Undecaprenyl-PP	HMDB
UPP	HMDB

Molecular Formula

C₅₅H₉₂O₇P₂

Average Mass

927.2623

Monoisotopic Mass

926.631828322

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

23-13-2

SMILES

Not Available

InChI Identifier

InChI=1S/C55H92O7P2/c1-45(2)23-13-24-46(3)25-14-26-47(4)27-15-28-48(5)29-16-30-49(6)31-17-32-50(7)33-18-34-51(8)35-19-36-52(9)37-20-38-53(10)39-21-40-54(11)41-22-42-55(12)43-44-61-64(59,60)62-63(56,57)58/h23,25,27,29,31,33,35,37,39,41,43H,13-22,24,26,28,30,32,34,36,38,40,42,44H2,1-12H3,(H,59,60)(H2,56,57,58)/b46-25+,47-27+,48-29+,49-31+,50-33+,51-35+,52-37+,53-39+,54-41+,55-43+

InChI Key

NTXGVHCCXVHYCL-RDQGWRCRSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as bactoprenol diphosphates. These are polyprenyl compounds consisting of a diphosphate group substituted by a bactoprenyl moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Polyprenols

Direct Parent

Bactoprenol diphosphates

Alternative Parents

Substituents

Polyterpenoid
Bactoprenol diphosphate
Polyprenyl diphosphate
Polyprenyl monophosphate
Organic pyrophosphate
Isoprenoid phosphate
Monoalkyl phosphate
Alkyl phosphate
Phosphoric acid ester
Organic phosphoric acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

undecaprenyl phosphate (CHEBI:17047 )
undecaprenyl diphosphate (CHEBI:17047 )
all-trans-polyprenyl diphosphate (CHEBI:17047 )
Bactoprenol diphosphates (LMPR03030004 )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Feces

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species
MMDBp0195924	Dehydrodolichyl diphosphate synthase	Enzyme	Q86SQ9	Homo_sapiens
MMDBp0195925	Nogo-B receptor	Enzyme	Q96E22	Homo_sapiens
MMDBp0195926	Dehydrodolichyl diphosphate synthase	Enzyme	Q5T0A0	Homo_sapiens
MMDBp0195927	Dehydrodolichyl diphosphate synthase	Enzyme	Q5T0A1	Homo_sapiens
MMDBp0195928	Dehydrodolichyl diphosphate synthase	Enzyme	Q5T0A2	Homo_sapiens
MMDBp0195929	Dehydrodolichyl diphosphate synthase	Enzyme	Q5T0A3	Homo_sapiens
MMDBp0195930	Dehydrodolichyl diphosphate synthase	Enzyme	Q5T0A6	Homo_sapiens

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	174	Human ; Human feces; Human sputum; Human unknown; Pig ; Human pleural fluid plaque; Human dental plaque; Human nasal swab; Human feces; pleural fluid plaque; bal	Unknown; Metabolic reconstruction
Bacteria	Firmicutes	369	Human feces; Human pleural fluid plaque; Human ; Pig ; Cattle	Metabolic reconstruction
Bacteria	Actinobacteria	119	Human feces; Human ; Human pleural fluid plaque; Human dental plaque; Human sputum; Human nasopharyngeal swab	Metabolic reconstruction
Bacteria	Verrucomicrobia	1	Human ; Human feces	Metabolic reconstruction
Bacteria	Bacteroidetes	116	Human feces; Human ; Human appendix biopsy	Metabolic reconstruction
Archaea	Euryarchaeota	5	Human feces; Human ; Cattle	Metabolic reconstruction
Bacteria	Synergistetes	3	Human feces	Metabolic reconstruction
Bacteria	Spirochaetes	1	Human feces	Metabolic reconstruction
Archaea	Thaumarchaeota	1	Human feces	Metabolic reconstruction
Bacteria	Fusobacteria	19	Human feces; Human	Metabolic reconstruction
Bacteria	Planctomycetes	1	Human feces	Metabolic reconstruction
Archaea	Crenarchaeota	1	Human feces	Metabolic reconstruction
Eukaryota/Fungi	Ascomycota	1	Human feces	Unknown