| MMDBm0000026 | Bacillus cereus AH187 (F4810/72) | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000116 | Clostridium beijerinckii NCIMB 8052 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000216 | Megamonas hypermegale ART12/1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000257 | Roseburia hominis A2-183 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000263 | Ruminococcus champanellensis 18P13 = JCM 17042 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000464 | Bacillus mycoides | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0000688 | Enterococcus saccharolyticus | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001146 | Clostridiales bacterium 1_7_47FAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001156 | Lachnospiraceae bacterium 5_1_63FAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001257 | Bacillus clausii KSM-K16 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001264 | Bacillus cereus G9842 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001476 | Clostridium sp. SY8519 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001994 | Caldicellulosiruptor saccharolyticus DSM 8903 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002107 | Megasphaera elsdenii DSM 20460 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002564 | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0002566 | Staphylococcus aureus subsp. aureus USA300FPR3757 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0730043 | Bacillus mycoides DSM 2048 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0730456 | Bacillus fordii DSM 16014 = CIP 108821 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0761185 | Bacillus firmus DS1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0767965 | Paenibacillus lactis 154 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0779527 | Staphylococcus equorum subsp. equorum Mu2 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0779566 | Staphylococcus pasteuri SP1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0779599 | Staphylococcus warneri SG1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0779603 | Staphylococcus xylosus NJ | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0784087 | Gemella haemolysans ATCC 10379 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |