| MMDBm0000012 | Agrobacterium tumefaciens F2 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000095 | Bradyrhizobium elkanii USDA 76 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000160 | Escherichia coli | Not Available | Proteobacteria | Human | Unknown | ECMDB |
| MMDBm0000194 | Klebsiella aerogenes KCTC 2190 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000221 | Ochrobactrum anthropi ATCC 49188 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000222 | Ochrobactrum intermedium LMG 3301 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001166 | Achromobacter xylosoxidans A8 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001501 | Cronobacter sakazakii ATCC BAA-894 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001596 | Escherichia fergusonii ATCC 35469 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001810 | Mesorhizobium loti MAFF303099 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001858 | Methylobacterium radiotolerans JCM 2831 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002232 | Shigella flexneri 2002017 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002397 | Pseudomonas fluorescens Pf0-1 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002531 | Shigella sonnei Ss046 | Not Available | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0417443 | Brevundimonas bacteroides DSM 4726 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0423522 | Bradyrhizobium japonicum USDA 6 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0435884 | Methylobacterium mesophilicum SR1.6/6 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0453897 | Paracoccus yeei ATCC BAA-599 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0461764 | Roseomonas mucosa ATCC BAA-692 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0480821 | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0482767 | Bordetella hinzii OH87 BAL007II | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0483496 | Burkholderia cepacia GG4 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0510057 | Desulfovibrio desulfuricans DSM 642 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533093 | Leminorella grimontii ATCC 33999 = DSM 5078 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533123 | Atlantibacter hermannii NBRC 105704 | Not Available | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
