MiMeDB: Showing metabocard for alpha-D-ribose 5-phosphate (MMDBc0033082)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-19 04:33:59 UTC

Update Date

2022-08-31 22:25:53 UTC

MiMeDB ID

MMDBc0033082

Metabolite Identification

Common Name

alpha-D-ribose 5-phosphate

Description

Structure

MOL SDF PDB SMILES InChI

Synonyms

Not Available

Chemical Formula

C₅H₁₁O₈P

Average Molecular Weight

230.1098

Monoisotopic Molecular Weight

230.01915384

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

4300-28-1

SMILES

Not Available

InChI Identifier

InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5+/m1/s1

InChI Key

KTVPXOYAKDPRHY-AIHAYLRMSA-N

Chemical Taxonomy

Functional Ontology

Not Available

Physical Properties

State

Solid

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Cytoplasm
Mitochondria

Biospecimen Locations

Blood
Feces
Prostate
Urine

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

#<MetaboliteProteinLink:0x000055b76defbbe8>

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Fungi	Ascomycota	1	Human Feces	Unknown

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details

Host Biospecimen and Location

Host and Biospecimen	Status	Age	Sex	Health Condition	Data Source	Reference
Human Feces	Detected but not Quantified	Children (6 - 18 years old)	Not Specified	Normal	HMDB	27609529	details
Human Urine	Detected but not Quantified	Adult (>18 years old)	Both	Normal	HMDB	32966057	details
Human Blood	Detected but not Quantified	Adult (>18 years old)	Both	Normal	HMDB	32966057	details
Human Prostate	Detected but not Quantified	Not Specified	Not Specified	Normal	HMDB	34986597	details

External Links

Not Available

References

Synthesis Reference

Not Available

General References

Sreekumar A, Poisson LM, Rajendiran TM, Khan AP, Cao Q, Yu J, Laxman B, Mehra R, Lonigro RJ, Li Y, Nyati MK, Ahsan A, Kalyana-Sundaram S, Han B, Cao X, Byun J, Omenn GS, Ghosh D, Pennathur S, Alexander DC, Berger A, Shuster JR, Wei JT, Varambally S, Beecher C, Chinnaiyan AM: Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature. 2009 Feb 12;457(7231):910-4. doi: 10.1038/nature07762. [PubMed:19212411 ]

Showing metabocard for alpha-D-ribose 5-phosphate (MMDBc0033082)

MOL for #<Metabolite:0x000055b76ddad980>

3D MOL for #<Metabolite:0x000055b76ddad980>

3D SDF for #<Metabolite:0x000055b76ddad980>

3D-SDF for #<Metabolite:0x000055b76ddad980>

PDB for #<Metabolite:0x000055b76ddad980>

3D PDB for #<Metabolite:0x000055b76ddad980>

SMILES for #<Metabolite:0x000055b76ddad980>

INCHI for #<Metabolite:0x000055b76ddad980>

Structure for #<Metabolite:0x000055b76ddad980>

3D Structure for #<Metabolite:0x000055b76ddad980>