MiMeDB: Showing metabocard for PC(o-22:2(13Z,16Z)/22:2(13Z,16Z)) (MMDBc0034210)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-19 05:20:49 UTC

Update Date

2022-12-15 22:52:13 UTC

MiMeDB ID

MMDBc0034210

Metabolite Identification

Common Name

PC(o-22:2(13Z,16Z)/22:2(13Z,16Z))

Description

PC(O-22:2(13Z,16Z)/22:2(13Z,16Z)) is a phosphatidylcholine (PC or GPCho). It is a glycerophospholipid in which a phosphorylcholine moiety occupies a glycerol substitution site. As is the case with diacylglycerols, glycerophosphocholines can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PC(O-22:2(13Z,16Z)/22:2(13Z,16Z)), in particular, consists of one chain of Docosadienyl alcohol at the C-1 position and one chain of docosadienoic acid at the C-2 position. The Docosadienyl alcohol moiety is derived from animal fat, while the docosadienoic acid moiety is derived from animal fats. Phospholipids, are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling. While most phospholipids have a saturated fatty acid on C-1 and an unsaturated fatty acid on C-2 of the glycerol backbone, the fatty acid distribution at the C-1 and C-2 positions of glycerol within phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. PCs can be synthesized via three different routes. In one route, choline is activated first by phosphorylation and then by coupling to CDP prior to attachment to phosphatidic acid. PCs can also synthesized by the addition of choline to CDP-activated 1,2-diacylglycerol. A third route to PC synthesis involves the conversion of either PS or PE to PC.

Structure

MOL SDF PDB SMILES InChI


  Mrv0541 02251208032D          

 61 60  0  0  0  0            999 V2000
    9.5470    5.8216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6041    6.6446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3453    7.0068    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4024    7.8298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1436    8.1919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2007    9.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9419    9.3771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9990   10.2001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7402   10.5623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4245   10.1014    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1657   10.4635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8500   10.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5913   10.3647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2755    9.9038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0168   10.2660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7010    9.8051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4423   10.1672    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1266    9.7063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8678   10.0684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5521    9.6075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2934    9.9697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9776    9.5088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.7189    9.8709    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.4031    9.4100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.1444    9.7721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.2014   10.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.9427   10.9573    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.9997   11.7803    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   24.1767   11.8374    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
   25.8228   11.7233    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.0568   12.6034    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.7980   12.9655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.8551   13.7885    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.5963   14.1506    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   26.9585   13.4094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.2342   14.8919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.3376   14.5128    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.8287    9.3113    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.5699    9.6734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.6270   10.4964    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.2542    9.2125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9955    9.5746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.6797    9.1137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.4210    9.4759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.1052    9.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.8465    9.3771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.9035   10.2001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.6448   10.5623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.3291   10.1014    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   32.0703   10.4635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   32.7546   10.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   33.4959   10.3647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.1801    9.9038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.9214   10.2660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.9784   11.0890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.7197   11.4511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.7767   12.2741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.5180   12.6363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.5750   13.4593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.3163   13.8214    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.3733   14.6445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  4  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  9  8  1  4  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  2  0  0  0  0
 28 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 34 36  1  0  0  0  0
 34 37  1  0  0  0  0
 25 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  2  0  0  0  0
 39 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 52 51  1  4  0  0  0
 52 53  2  0  0  0  0
 53 54  1  0  0  0  0
 55 54  1  4  0  0  0
 55 56  2  0  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 58 59  1  0  0  0  0
 59 60  1  0  0  0  0
 60 61  1  0  0  0  0
M  CHG  2  29  -1  34   1
M  END


  Mrv0541 02251208032D          

 61 60  0  0  0  0            999 V2000
    9.5470    5.8216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6041    6.6446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3453    7.0068    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4024    7.8298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1436    8.1919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2007    9.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9419    9.3771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9990   10.2001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7402   10.5623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4245   10.1014    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1657   10.4635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8500   10.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5913   10.3647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2755    9.9038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0168   10.2660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7010    9.8051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4423   10.1672    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1266    9.7063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8678   10.0684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5521    9.6075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2934    9.9697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9776    9.5088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.7189    9.8709    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.4031    9.4100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.1444    9.7721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.2014   10.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.9427   10.9573    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.9997   11.7803    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   24.1767   11.8374    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
   25.8228   11.7233    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.0568   12.6034    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.7980   12.9655    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.8551   13.7885    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.5963   14.1506    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   26.9585   13.4094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.2342   14.8919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.3376   14.5128    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.8287    9.3113    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.5699    9.6734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.6270   10.4964    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.2542    9.2125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9955    9.5746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.6797    9.1137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.4210    9.4759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.1052    9.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.8465    9.3771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.9035   10.2001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.6448   10.5623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.3291   10.1014    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   32.0703   10.4635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   32.7546   10.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   33.4959   10.3647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.1801    9.9038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.9214   10.2660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.9784   11.0890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.7197   11.4511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.7767   12.2741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.5180   12.6363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.5750   13.4593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.3163   13.8214    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.3733   14.6445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  4  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  9  8  1  4  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  2  0  0  0  0
 28 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 34 36  1  0  0  0  0
 34 37  1  0  0  0  0
 25 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  2  0  0  0  0
 39 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 52 51  1  4  0  0  0
 52 53  2  0  0  0  0
 53 54  1  0  0  0  0
 55 54  1  4  0  0  0
 55 56  2  0  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 58 59  1  0  0  0  0
 59 60  1  0  0  0  0
 60 61  1  0  0  0  0
M  CHG  2  29  -1  34   1
M  END
> <DATABASE_ID>
MMDBc0034210

> <DATABASE_NAME>
MIME

> <SMILES>
CCCCCC=CCC=CCCCCCCCCCCCCOCC(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCC=CCC=CCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C52H98NO7P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-38-40-42-44-47-57-49-51(50-59-61(55,56)58-48-46-53(3,4)5)60-52(54)45-43-41-39-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h14-17,20-23,51H,6-13,18-19,24-50H2,1-5H3

> <INCHI_KEY>
GCAMFMBVIXVYSA-UHFFFAOYSA-N

> <FORMULA>
C52H98NO7P

> <MOLECULAR_WEIGHT>
880.3108

> <EXACT_MASS>
879.708091007

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
112.61111957622111

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2-{[3-(docosa-13,16-dien-1-yloxy)-2-(docosa-13,16-dienoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium

> <ALOGPS_LOGP>
7.09

> <JCHEM_LOGP>
12.381729328528257

> <ALOGPS_LOGS>
-7.59

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8550607479245658

> <JCHEM_PKA_STRONGEST_BASIC>
-4.141001335677688

> <JCHEM_POLAR_SURFACE_AREA>
94.12

> <JCHEM_REFRACTIVITY>
275.78889999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
48

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.38e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2-{[3-(docosa-13,16-dien-1-yloxy)-2-(docosa-13,16-dienoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 25-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   25-FEB-12         0                                  
HETATM    1  C   UNK     0      17.821  10.867   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      17.928  12.403   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      19.311  13.079   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      19.418  14.616   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      20.801  15.292   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      20.908  16.828   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      22.292  17.504   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      22.398  19.040   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      23.782  19.716   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      25.059  18.856   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      26.443  19.532   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      27.720  18.672   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      29.104  19.347   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      30.381  18.487   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      31.765  19.163   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      33.042  18.303   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      34.426  18.979   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      35.703  18.118   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      37.087  18.794   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      38.364  17.934   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      39.748  18.610   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      41.025  17.750   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      42.409  18.426   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      43.686  17.565   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      45.070  18.241   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      45.176  19.778   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      46.560  20.454   0.000  0.00  0.00           O+0
HETATM   28  P   UNK     0      46.666  21.990   0.000  0.00  0.00           P+0
HETATM   29  O   UNK     0      45.130  22.096   0.000  0.00  0.00           O-1
HETATM   30  O   UNK     0      48.203  21.883   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0      46.773  23.526   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      48.156  24.202   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      48.263  25.739   0.000  0.00  0.00           C+0
HETATM   34  N   UNK     0      49.646  26.414   0.000  0.00  0.00           N+1
HETATM   35  C   UNK     0      50.323  25.031   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      48.971  27.798   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      51.030  27.091   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      46.347  17.381   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0      47.730  18.057   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      47.837  19.593   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0      49.008  17.197   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      50.392  17.873   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      51.669  17.012   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      53.053  17.688   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      54.330  16.828   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      55.713  17.504   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      55.820  19.040   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      57.204  19.716   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      58.481  18.856   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      59.865  19.532   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      61.142  18.672   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      62.526  19.347   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      63.803  18.487   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      65.187  19.163   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      65.293  20.699   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      66.677  21.375   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      66.783  22.912   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0      68.167  23.588   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      68.273  25.124   0.000  0.00  0.00           C+0
HETATM   60  C   UNK     0      69.657  25.800   0.000  0.00  0.00           C+0
HETATM   61  C   UNK     0      69.763  27.336   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26   38                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29   30   31                                             
CONECT   29   28                                                            
CONECT   30   28                                                            
CONECT   31   28   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35   36   37                                             
CONECT   35   34                                                            
CONECT   36   34                                                            
CONECT   37   34                                                            
CONECT   38   25   39                                                       
CONECT   39   38   40   41                                                  
CONECT   40   39                                                            
CONECT   41   39   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56   58                                                       
CONECT   58   57   59                                                       
CONECT   59   58   60                                                       
CONECT   60   59   61                                                       
CONECT   61   60                                                            
MASTER        0    0    0    0    0    0    0    0   61    0  120    0
END

Synonyms

Not Available

Chemical Formula

C₅₂H₉₈NO₇P

Average Molecular Weight

880.3108

Monoisotopic Molecular Weight

879.708091007

IUPAC Name

(2-{[3-(docosa-13,16-dien-1-yloxy)-2-(docosa-13,16-dienoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium

Traditional Name

(2-{[3-(docosa-13,16-dien-1-yloxy)-2-(docosa-13,16-dienoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium

CAS Registry Number

Not Available

SMILES

CCCCCC=CCC=CCCCCCCCCCCCCOCC(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCC=CCC=CCCCCC

InChI Identifier

InChI=1S/C52H98NO7P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-38-40-42-44-47-57-49-51(50-59-61(55,56)58-48-46-53(3,4)5)60-52(54)45-43-41-39-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h14-17,20-23,51H,6-13,18-19,24-50H2,1-5H3

InChI Key

GCAMFMBVIXVYSA-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 1-alkyl,2-acylglycero-3-phosphocholines. These are glycerophosphocholines that carry exactly one acyl chain attached to the glycerol moiety through an ester linkage at the O2-position, and one alkyl chain attached through an ether linkage at the O1-position.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Glycerophospholipids

Sub Class

Glycerophosphocholines

Direct Parent

1-alkyl,2-acylglycero-3-phosphocholines

Alternative Parents

Substituents

1-alkyl,2-acylglycero-3-phosphocholine
Phosphocholine
Fatty acid ester
Dialkyl phosphate
Glycerol ether
Organic phosphoric acid derivative
Phosphoric acid ester
Fatty acyl
Alkyl phosphate
Tetraalkylammonium salt
Quaternary ammonium salt
Carboxylic acid ester
Carboxylic acid derivative
Dialkyl ether
Ether
Monocarboxylic acid or derivatives
Organonitrogen compound
Organopnictogen compound
Organic oxygen compound
Carbonyl group
Amine
Organic nitrogen compound
Organooxygen compound
Organic oxide
Hydrocarbon derivative
Organic salt
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Solid

Predicted Properties

Property	Value	Source
Water Solubility	2.4e-05 g/L	ALOGPS
logP	7.09	ALOGPS
logP	12.38	ChemAxon
logS	-7.6	ALOGPS
pKa (Strongest Acidic)	1.86	ChemAxon
pKa (Strongest Basic)	-4.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	94.12 Å²	ChemAxon
Rotatable Bond Count	48	ChemAxon
Refractivity	275.79 m³·mol⁻¹	ChemAxon
Polarizability	112.61 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

All Tissues
Blood
Feces
Saliva
Urine

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Reference
Obesity	Increased	This associated disease is originally imported from HMDB metabolite HMDB0013455 concentration id 139887	Association	Human Urine	26910390	details
Obesity		This associated disease is originally imported from HMDB metabolite HMDB0013455 concentration id 141042	Association	Human Blood	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children	details
Obesity		This associated disease is originally imported from HMDB metabolite HMDB0013455 concentration id 141043	Association	Human Blood	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children	details

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Fungi	Ascomycota	1	Human Feces	Unknown

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Age	Sex	Health Condition	Data Source	Reference
Human	Detected and Quantified	2.58	0.18			Adolescent (13-18 years old)	Both	Obese	HMDB	26910390	details
Human	Detected and Quantified	0.7322	0.2906			Adult (>18 years old)	Female	Pregnancy	HMDB	24704061	details
Human	Detected and Quantified	0.14	0.08			Adult (>18 years old)	Both	Normal	HMDB	27624970	details
Human	Detected and Quantified	0.16	0.1			Adult (>18 years old)	Both	Normal	HMDB	27624970	details
Human	Detected and Quantified	0.25		0.22	0.3	Newborn (0-30 days old)		Normal	HMDB	25754623	details
Human	Detected and Quantified	0.39	0.09			Adult (>18 years old)	Both	Normal	HMDB	28278231	details
Human	Detected and Quantified	0.4		0.33	0.47	Infant (0-1 year old)		Normal	HMDB	25754623	details
Human	Detected and Quantified	0.46	0.15			Adult (>18 years old)	Both	Normal	HMDB	26010610	details
Human	Detected and Quantified	2.13	0.10			Adolescent (13-18 years old)	Both	Normal	HMDB	26910390	details
Human	Detected and Quantified	0.354	0.114			Children (1-13 years old)	Both	Obesity	HMDB	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children	details
Human	Detected and Quantified	0.385	0.110			Children (1-13 years old)	Both	Obesity	HMDB	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children	details
Human	Detected and Quantified	0.043	0.004			Adult (>18 years old)	Both	Normal	HMDB	Zerihun T. Dame, Farid Aziat, Rupasri Mandal, Ram Krishnamurthy, Souhaila Bouatra, Shima Borzouie, An Chi Guo, Tanvir Sajed, Lu Deng, Hong Lin, Philip Liu, Edison Dong, David S. Wishart "The human saliva metabolome" Metabolomics (2015) DOI 10.1007/s11306-015-0840-5	details
Human All Tissues	Detected but not Quantified					Not Specified	Not Specified	Normal	HMDB	34986597	details

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

76043957

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Divecha N, Irvine RF: Phospholipid signaling. Cell. 1995 Jan 27;80(2):269-78. doi: 10.1016/0092-8674(95)90409-3. [PubMed:7834746 ]
Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. doi: 10.1038/35036052. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. doi: 10.1194/jlr.R600022-JLR200. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. doi: 10.1194/jlr.R700005-JLR200. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.
Cevc, Gregor (1993). Phospholipids Handbook. Marcel Dekker.

Showing metabocard for PC(o-22:2(13Z,16Z)/22:2(13Z,16Z)) (MMDBc0034210)

MOL for #<Metabolite:0x000055b76de0c340>

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PDB for #<Metabolite:0x000055b76de0c340>

3D PDB for #<Metabolite:0x000055b76de0c340>

SMILES for #<Metabolite:0x000055b76de0c340>

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Structure for #<Metabolite:0x000055b76de0c340>

3D Structure for #<Metabolite:0x000055b76de0c340>