MiMeDB: Showing metabocard for (z)-Ocimene (MMDBc0047628)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-19 15:34:53 UTC

Update Date

2022-09-01 01:47:24 UTC

MiMeDB ID

MMDBc0047628

Metabolite Identification

Common Name

(z)-Ocimene

Description

true

Structure

MOL SDF PDB SMILES InChI

Synonyms

Not Available

Chemical Formula

C₁₀H₁₆

Average Molecular Weight

136.234

Monoisotopic Molecular Weight

136.125200512

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

InChI=1S/C10H16/c1-5-10(4)8-6-7-9(2)3/h5,7-8H,1,6H2,2-4H3/b10-8-

InChI Key

IHPKGUQCSIINRJ-NTMALXAHSA-N

Chemical Taxonomy

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Saliva

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Fungi	Ascomycota	1	Human Feces	Unknown

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details
Plant	Fruit	Carica papaya	FooDB	31437929	details
Plant		Salvia officinalis	FooDB	31437929	details
Plant	Shoot	Hyssopus officinalis	FooDB	31437929	details
Plant	Petiole	Citrus limon	FooDB	31437929	details
Plant	Fruit	Illicium verum	FooDB	31437929	details
Plant	Root	Pastinaca sativa	FooDB	31437929	details
Plant	Leaves	Camellia sinensis	FooDB	31437929	details
Plant	Shoot	Melissa officinalis	FooDB	31437929	details
Plant	Fruit	Coriandrum sativum	FooDB	31437929	details
Plant	Leaf essential oil	Pimenta dioica	FooDB	31437929	details
Plant	Leaves	Laurus nobilis	FooDB	31437929	details
Plant	Fruit	Citrus sinensis	FooDB	31437929	details
Plant	Shoot	Rosmarinus officinalis	FooDB	31437929	details
Plant		Apium graveolens var. dulce	FooDB	31437929	details
Plant	Essential oil	Artemisia dracunculus	FooDB	31437929	details
Plant	Leaves	Apium graveolens	FooDB	31437929	details
Plant	Root	Daucus carota ssp. sativus	FooDB	31437929	details
Plant	Seed	Pimpinella anisum	FooDB	31437929	details
Plant	Fruit	Ribes nigrum	FooDB	31437929	details
Plant	Essential oil	Mentha arvensis	FooDB	31437929	details
Plant	Fruit	Citrus reticulata	FooDB	31437929	details
Plant	Plant	Ocimum basilicum	FooDB	31437929	details
Plant	Bark	Cinnamomum verum	FooDB	31437929	details
Plant	Fruit	Piper nigrum	FooDB	31437929	details
Plant	Leaves	Petroselinum crispum	FooDB	31437929	details
Plant		Apium graveolens var. rapaceum	FooDB	31437929	details
Plant	Leaves		FooDB	31437929	details
Plant	Seed	Carum carvi	FooDB	31437929	details
Plant	Leaves		FooDB	31437929	details
Plant	Shoot	Mentha spicata	FooDB	31437929	details
Plant	Plant	Origanum vulgare	FooDB	31437929	details
Plant	Fruit	Capsicum annuum	FooDB	31437929	details
Plant	Plant	Satureja montana	FooDB	31437929	details
Plant	Shoot	Origanum onites	FooDB	31437929	details
Plant	Pericarp essent. oil	Psidium guajava	FooDB	31437929	details
Plant	Leaves		FooDB	31437929	details
Plant	Seed	Foeniculum vulgare	FooDB	31437929	details
Plant	Leaf essential oil	Salvia officinalis	FooDB	31437929	details
Plant	Flower	Hyssopus officinalis	FooDB	31437929	details
Plant	Essential oil	Anethum graveolens	FooDB	31437929	details
Plant	Shoot	Mentha aquatica	FooDB	31437929	details
Plant	Leaves	Hyssopus officinalis	FooDB	31437929	details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Saliva	Detected but not Quantified						Adult (>18 years old)	Not Specified	Normal	HMDB	24421258	details

External Links

Not Available

References

Synthesis Reference

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. doi: 10.1038/35036052. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. doi: 10.1194/jlr.R600022-JLR200. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. doi: 10.1194/jlr.R700005-JLR200. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.
Afendi FM, Okada T, Yamazaki M, Hirai-Morita A, Nakamura Y, Nakamura K, Ikeda S, Takahashi H, Altaf-Ul-Amin M, Darusman LK, Saito K, Kanaya S. (2012). Afendi FM, Okada T, Yamazaki M, Hirai-Morita A, Nakamura Y, Nakamura K, Ikeda S, Takahashi H, Altaf-Ul-Amin M, Darusman LK, Saito K, Kanaya S. (2012) KNApSAcK family databases: integrated metabolite-plant species databases for multifaceted plant research. Plant Cell Physiol. 2012 Feb;53(2):e1.. Plant Cell Physiol..

Showing metabocard for (z)-Ocimene (MMDBc0047628)

MOL for #<Metabolite:0x000055b76a62f260>

3D MOL for #<Metabolite:0x000055b76a62f260>

3D SDF for #<Metabolite:0x000055b76a62f260>

3D-SDF for #<Metabolite:0x000055b76a62f260>

PDB for #<Metabolite:0x000055b76a62f260>

3D PDB for #<Metabolite:0x000055b76a62f260>

SMILES for #<Metabolite:0x000055b76a62f260>

INCHI for #<Metabolite:0x000055b76a62f260>

Structure for #<Metabolite:0x000055b76a62f260>

3D Structure for #<Metabolite:0x000055b76a62f260>