MiMeDB: Showing metabocard for (glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol (MMDBc0047900)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-19 15:48:12 UTC

Update Date

2022-09-01 02:00:44 UTC

Metabolite ID

MMDBc0047900

Metabolite Identification

Common Name

(glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol

Description

(glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol ⇥ belongs to the class of organic compounds known as polyprenyl phospho carbohydrates. These are polyprenyl phosphates with a carbohydrate moiety attached to it (glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol ⇥ is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL SDF PDB SMILES InChI

Synonyms

Not Available

Molecular Formula

C₁₆₈H₂₇₈N₂O₇₇P₂

Average Mass

3619.958

Monoisotopic Mass

3617.738553855

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

InChI=1S/C168H280N2O77P2/c1-81(2)35-20-36-82(3)37-21-38-83(4)39-22-40-84(5)41-23-42-85(6)43-24-44-86(7)45-25-46-87(8)47-26-48-88(9)49-27-50-89(10)51-28-52-90(11)53-29-54-91(12)55-30-56-92(13)57-31-58-93(14)59-32-60-94(15)61-33-62-95(16)63-34-64-96(17)65-66-220-248(214,215)247-249(216,217)246-156-114(170-98(19)184)128(198)144(110(78-182)232-156)235-155-113(169-97(18)183)127(197)145(109(77-181)231-155)236-163-143(213)149(126(196)112(234-163)79-218-157-140(210)148(239-166-152(134(204)120(190)104(72-176)228-166)243-160-139(209)131(201)117(187)101(69-173)223-160)125(195)111(233-157)80-219-164-150(132(202)118(188)102(70-174)226-164)241-158-137(207)129(199)115(185)99(67-171)221-158)240-167-154(136(206)122(192)105(73-177)229-167)245-168-153(135(205)121(191)106(74-178)230-168)244-162-141(211)146(123(193)107(75-179)225-162)237-161-142(212)147(124(194)108(76-180)224-161)238-165-151(133(203)119(189)103(71-175)227-165)242-159-138(208)130(200)116(186)100(68-172)222-159/h35,37,39,41,43,45,47,49,51,53,55,57,59,61,63,96,99-168,171-182,185-213H,20-34,36,38,40,42,44,46,48,50,52,54,56,58,60,62,64-80H2,1-19H3,(H,169,183)(H,170,184)(H,214,215)(H,216,217)/p-2

InChI Key

VOBIUONKNAOEKQ-UHFFFAOYSA-L

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as polyprenyl phospho carbohydrates. These are polyprenyl phosphates with a carbohydrate moiety attached to it.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Polyprenols

Direct Parent

Polyprenyl phospho carbohydrates

Alternative Parents

Substituents

Polysaccharide
Polyterpenoid
Polyprenyl phospho carbohydrate
Dolichyl diphosphate
Polyprenyl monophosphate
Polyprenyl phosphate skeleton
N-acyl-alpha-hexosamine
Glycosyl compound
O-glycosyl compound
Organic pyrophosphate
Organic phosphoric acid derivative
Alkyl phosphate
Oxane
Phosphoric acid ester
Acetamide
Carboxamide group
Secondary carboxylic acid amide
Secondary alcohol
Carboxylic acid derivative
Polyol
Oxacycle
Organoheterocyclic compound
Acetal
Organopnictogen compound
Organic oxygen compound
Organonitrogen compound
Organooxygen compound
Alcohol
Hydrocarbon derivative
Primary alcohol
Organic oxide
Carbonyl group
Organic nitrogen compound
Organic anion
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Unknown

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

Wishart DS, Li C, Marcu A, Badran H, Pon A, Budinski Z, Patron J, Lipton D, Cao X, Oler E, Li K, Paccoud M, Hong C, Guo AC, Chan C, Wei W, Ramirez-Gaona M: PathBank: a comprehensive pathway database for model organisms. Nucleic Acids Res. 2020 Jan 8;48(D1):D470-D478. doi: 10.1093/nar/gkz861. [PubMed:31602464 ]

Showing metabocard for (glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol (MMDBc0047900)

MOL for #<Metabolite:0x00007f1241017bd8>

3D MOL for #<Metabolite:0x00007f1241017bd8>

3D SDF for #<Metabolite:0x00007f1241017bd8>

3D-SDF for #<Metabolite:0x00007f1241017bd8>

PDB for #<Metabolite:0x00007f1241017bd8>

3D PDB for #<Metabolite:0x00007f1241017bd8>

SMILES for #<Metabolite:0x00007f1241017bd8>

INCHI for #<Metabolite:0x00007f1241017bd8>

Structure for #<Metabolite:0x00007f1241017bd8>

3D Structure for #<Metabolite:0x00007f1241017bd8>