MiMeDB: Showing metabocard for dTDP-L-dihydrostreptose (MMDBc0053209)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2022-05-16 21:17:26 UTC

Update Date

2022-09-01 02:19:39 UTC

MiMeDB ID

MMDBc0053209

Metabolite Identification

Common Name

dTDP-L-dihydrostreptose

Description

dTDP-L-dihydrostreptose belongs to the class of organic compounds known as pyrimidine nucleotide sugars. These are pyrimidine nucleotides bound to a saccharide derivative through the terminal phosphate group. dTDP-L-dihydrostreptose is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a small amount of articles have been published on dTDP-L-dihydrostreptose.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305142018302D          

 35 37  0  0  1  0            999 V2000
    3.5230   -0.4806    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9544    0.7416    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.8494    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2657   -1.2676    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2429    1.1654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6810    1.1654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1910   -0.4806    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4408   -1.2676    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2429    1.9981    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5316    0.7568    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6810    1.9981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4077   -0.2232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9526   -1.9298    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9581    2.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3923    2.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7947   -0.7719    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9544    3.2316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0301   -0.7681    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8513   -0.7681    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0301    0.0529    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0301   -1.5931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6763   -0.7681    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4974   -0.7719    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6763    0.0529    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6763   -1.5931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2769   -1.0293    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5305   -1.8163    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9467   -0.5486    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3592   -1.8163    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0461   -2.4823    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6090   -1.0293    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.8473   -2.4786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1614   -2.0245    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3923   -0.7719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5144   -3.2316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  1  0  0  0
  1  3  1  0  0  0  0
  1  4  1  0  0  0  0
  2  5  1  0  0  0  0
  2  6  1  0  0  0  0
  3  7  1  0  0  0  0
  4  8  1  0  0  0  0
  5  9  1  0  0  0  0
  5 10  2  0  0  0  0
  6 11  2  0  0  0  0
  7 12  1  1  0  0  0
  8 13  1  6  0  0  0
  9 14  1  0  0  0  0
 11 15  1  0  0  0  0
 12 16  1  0  0  0  0
 14 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 18 21  2  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  2  0  0  0  0
 26 23  1  6  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 27 29  1  0  0  0  0
 27 30  1  6  0  0  0
 28 31  1  0  0  0  0
 29 32  1  1  0  0  0
 29 33  1  0  0  0  0
 31 34  1  6  0  0  0
 32 35  1  0  0  0  0
  7  8  1  0  0  0  0
 11 14  1  0  0  0  0
 29 31  1  0  0  0  0
M  END


  Mrv1652305142018302D          

 35 37  0  0  1  0            999 V2000
    3.5230   -0.4806    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9544    0.7416    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.8494    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2657   -1.2676    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2429    1.1654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6810    1.1654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1910   -0.4806    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4408   -1.2676    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2429    1.9981    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5316    0.7568    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6810    1.9981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4077   -0.2232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9526   -1.9298    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9581    2.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3923    2.4104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7947   -0.7719    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9544    3.2316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0301   -0.7681    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8513   -0.7681    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0301    0.0529    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0301   -1.5931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6763   -0.7681    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4974   -0.7719    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6763    0.0529    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6763   -1.5931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2769   -1.0293    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5305   -1.8163    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9467   -0.5486    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3592   -1.8163    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0461   -2.4823    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6090   -1.0293    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.8473   -2.4786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1614   -2.0245    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3923   -0.7719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5144   -3.2316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  1  0  0  0
  1  3  1  0  0  0  0
  1  4  1  0  0  0  0
  2  5  1  0  0  0  0
  2  6  1  0  0  0  0
  3  7  1  0  0  0  0
  4  8  1  0  0  0  0
  5  9  1  0  0  0  0
  5 10  2  0  0  0  0
  6 11  2  0  0  0  0
  7 12  1  1  0  0  0
  8 13  1  6  0  0  0
  9 14  1  0  0  0  0
 11 15  1  0  0  0  0
 12 16  1  0  0  0  0
 14 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 18 21  2  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  2  0  0  0  0
 26 23  1  6  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 27 29  1  0  0  0  0
 27 30  1  6  0  0  0
 28 31  1  0  0  0  0
 29 32  1  1  0  0  0
 29 33  1  0  0  0  0
 31 34  1  6  0  0  0
 32 35  1  0  0  0  0
  7  8  1  0  0  0  0
 11 14  1  0  0  0  0
 29 31  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0053209

> <DATABASE_NAME>
MIME

> <SMILES>
C[C@@H]1O[C@H](OP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H](C[C@@H]2O)N2C=C(C)C(=O)NC2=O)[C@H](O)[C@@]1(O)CO

> <INCHI_IDENTIFIER>
InChI=1S/C16H26N2O15P2/c1-7-4-18(15(23)17-13(7)22)11-3-9(20)10(31-11)5-29-34(25,26)33-35(27,28)32-14-12(21)16(24,6-19)8(2)30-14/h4,8-12,14,19-21,24H,3,5-6H2,1-2H3,(H,25,26)(H,27,28)(H,17,22,23)/t8-,9-,10+,11+,12-,14+,16+/m0/s1

> <INCHI_KEY>
LOULRGSWJAXPFN-JHJMUWKLSA-N

> <FORMULA>
C16H26N2O15P2

> <MOLECULAR_WEIGHT>
548.331

> <EXACT_MASS>
548.080842141

> <JCHEM_ACCEPTOR_COUNT>
12

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
45.86651714703406

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
{[(2R,3R,4S,5S)-3,4-dihydroxy-4-(hydroxymethyl)-5-methyloxolan-2-yl]oxy}({[hydroxy({[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl]methoxy})phosphoryl]oxy})phosphinic acid

> <ALOGPS_LOGP>
-0.95

> <JCHEM_LOGP>
-2.7895079160000007

> <ALOGPS_LOGS>
-1.73

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
3.176302079956966

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.732554214557518

> <JCHEM_PKA_STRONGEST_BASIC>
-3.146095613968667

> <JCHEM_POLAR_SURFACE_AREA>
251.07999999999993

> <JCHEM_REFRACTIVITY>
107.97789999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.02e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(2R,3R,4S,5S)-3,4-dihydroxy-4-(hydroxymethyl)-5-methyloxolan-2-yl]oxy([hydroxy([(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3H-pyrimidin-1-yl)oxolan-2-yl]methoxy)phosphoryl]oxy)phosphinic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 14-MAY-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   14-MAY-20         0                                  
HETATM    1  C   UNK     0       6.576  -0.897   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0       7.382   1.384   0.000  0.00  0.00           N+0
HETATM    3  O   UNK     0       5.319   0.000   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       6.096  -2.366   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.053   2.175   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.738   2.175   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.090  -0.897   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.556  -2.366   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       6.053   3.730   0.000  0.00  0.00           N+0
HETATM   10  O   UNK     0       4.726   1.413   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       8.738   3.730   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.628  -0.417   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       3.645  -3.602   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       7.388   4.499   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.066   4.499   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       1.483  -1.441   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0       7.382   6.032   0.000  0.00  0.00           O+0
HETATM   18  P   UNK     0      -0.056  -1.434   0.000  0.00  0.00           P+0
HETATM   19  O   UNK     0      -1.589  -1.434   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0      -0.056   0.099   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0      -0.056  -2.974   0.000  0.00  0.00           O+0
HETATM   22  P   UNK     0      -3.129  -1.434   0.000  0.00  0.00           P+0
HETATM   23  O   UNK     0      -4.662  -1.441   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0      -3.129   0.099   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0      -3.129  -2.974   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      -6.117  -1.921   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -6.590  -3.390   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      -7.367  -1.024   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      -8.137  -3.390   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -5.686  -4.634   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      -8.603  -1.921   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -9.048  -4.627   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      -9.635  -3.779   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0     -10.066  -1.441   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      -8.427  -6.032   0.000  0.00  0.00           O+0
CONECT    1    2    3    4                                                  
CONECT    2    1    5    6                                                  
CONECT    3    1    7                                                       
CONECT    4    1    8                                                       
CONECT    5    2    9   10                                                  
CONECT    6    2   11                                                       
CONECT    7    3   12    8                                                  
CONECT    8    4   13    7                                                  
CONECT    9    5   14                                                       
CONECT   10    5                                                            
CONECT   11    6   15   14                                                  
CONECT   12    7   16                                                       
CONECT   13    8                                                            
CONECT   14    9   17   11                                                  
CONECT   15   11                                                            
CONECT   16   12   18                                                       
CONECT   17   14                                                            
CONECT   18   16   19   20   21                                             
CONECT   19   18   22                                                       
CONECT   20   18                                                            
CONECT   21   18                                                            
CONECT   22   19   23   24   25                                             
CONECT   23   22   26                                                       
CONECT   24   22                                                            
CONECT   25   22                                                            
CONECT   26   23   27   28                                                  
CONECT   27   26   29   30                                                  
CONECT   28   26   31                                                       
CONECT   29   27   32   33   31                                             
CONECT   30   27                                                            
CONECT   31   28   34   29                                                  
CONECT   32   29   35                                                       
CONECT   33   29                                                            
CONECT   34   31                                                            
CONECT   35   32                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   74    0
END

Synonyms

Not Available

Chemical Formula

C₁₆H₂₆N₂O₁₅P₂

Average Molecular Weight

548.331

Monoisotopic Molecular Weight

548.080842141

IUPAC Name

{[(2R,3R,4S,5S)-3,4-dihydroxy-4-(hydroxymethyl)-5-methyloxolan-2-yl]oxy}({[hydroxy({[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl]methoxy})phosphoryl]oxy})phosphinic acid

Traditional Name

[(2R,3R,4S,5S)-3,4-dihydroxy-4-(hydroxymethyl)-5-methyloxolan-2-yl]oxy([hydroxy([(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3H-pyrimidin-1-yl)oxolan-2-yl]methoxy)phosphoryl]oxy)phosphinic acid

CAS Registry Number

Not Available

SMILES

C[C@@H]1O[C@H](OP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H](C[C@@H]2O)N2C=C(C)C(=O)NC2=O)[C@H](O)[C@@]1(O)CO

InChI Identifier

InChI=1S/C16H26N2O15P2/c1-7-4-18(15(23)17-13(7)22)11-3-9(20)10(31-11)5-29-34(25,26)33-35(27,28)32-14-12(21)16(24,6-19)8(2)30-14/h4,8-12,14,19-21,24H,3,5-6H2,1-2H3,(H,25,26)(H,27,28)(H,17,22,23)/t8-,9-,10+,11+,12-,14+,16+/m0/s1

InChI Key

LOULRGSWJAXPFN-JHJMUWKLSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyrimidine nucleotide sugars. These are pyrimidine nucleotides bound to a saccharide derivative through the terminal phosphate group.

Kingdom

Organic compounds

Super Class

Nucleosides, nucleotides, and analogues

Class

Pyrimidine nucleotides

Sub Class

Pyrimidine nucleotide sugars

Direct Parent

Pyrimidine nucleotide sugars

Alternative Parents

Substituents

Pyrimidine nucleotide sugar
Pyrimidine 2'-deoxyribonucleoside diphosphate
Pentose phosphate
Monosaccharide phosphate
Organic pyrophosphate
Monoalkyl phosphate
Pyrimidone
Hydropyrimidine
Monosaccharide
Alkyl phosphate
Organic phosphoric acid derivative
Pyrimidine
Phosphoric acid ester
Heteroaromatic compound
Vinylogous amide
Tertiary alcohol
Oxolane
Lactam
1,2-diol
Urea
Secondary alcohol
Azacycle
Organoheterocyclic compound
Oxacycle
Organooxygen compound
Organonitrogen compound
Alcohol
Hydrocarbon derivative
Organic nitrogen compound
Organic oxide
Primary alcohol
Organic oxygen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	10.2 g/L	ALOGPS
logP	-0.95	ALOGPS
logP	-2.8	ChemAxon
logS	-1.7	ALOGPS
pKa (Strongest Acidic)	1.73	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	12	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	251.08 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	107.98 m³·mol⁻¹	ChemAxon
Polarizability	45.87 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_4_15) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
	Actinobacteria	1

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

30791418

KEGG Compound ID

C03442

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

24892737

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for dTDP-L-dihydrostreptose (MMDBc0053209)

MOL for #<Metabolite:0x0000564abef67048>

3D MOL for #<Metabolite:0x0000564abef67048>

3D SDF for #<Metabolite:0x0000564abef67048>

3D-SDF for #<Metabolite:0x0000564abef67048>

PDB for #<Metabolite:0x0000564abef67048>

3D PDB for #<Metabolite:0x0000564abef67048>

SMILES for #<Metabolite:0x0000564abef67048>

INCHI for #<Metabolite:0x0000564abef67048>

Structure for #<Metabolite:0x0000564abef67048>

3D Structure for #<Metabolite:0x0000564abef67048>