MiMeDB: Showing metabocard for [N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]3 (MMDBc0055094)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2022-06-17 19:41:57 UTC

Update Date

2022-08-12 20:09:13 UTC

Metabolite ID

MMDBc0055094

Metabolite Identification

Common Name

[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]3

Description

triglucosyl-(2,3-dihydroxybenzoylserine)3 belongs to the class of organic compounds known as glycodepsipeptides. Glycodepsipeptides are compounds in which a carbohydrate component is linked to a depsipeptide component. Based on a literature review very few articles have been published on triglucosyl-(2,3-dihydroxybenzoylserine)3.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652306172221412D          

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M  CHG  1  56  -1
M  END


  Mrv1652306172221412D          

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 42100  1  6  0  0  0
M  CHG  1  56  -1
M  END
> <DATABASE_ID>
MMDBc0055094

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@](CO)(N=C(O)C1=C(O)C([O-])=CC(=C1)[C@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(=O)OC[C@]([H])(N=C(O)C1=C(O)C(O)=CC(=C1)[C@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(=O)OC[C@]([H])(N=C(O)C1=C(O)C(O)=CC(=C1)[C@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C48H59N3O31/c52-7-19(49-43(71)16-1-13(4-22(56)28(16)59)40-37(68)34(65)31(62)25(8-53)80-40)47(76)79-12-21(51-45(73)18-3-15(6-24(58)30(18)61)42-39(70)36(67)33(64)27(10-55)82-42)48(77)78-11-20(46(74)75)50-44(72)17-2-14(5-23(57)29(17)60)41-38(69)35(66)32(63)26(9-54)81-41/h1-6,19-21,25-27,31-42,52-70H,7-12H2,(H,49,71)(H,50,72)(H,51,73)(H,74,75)/p-1/t19-,20-,21-,25+,26+,27+,31+,32+,33+,34-,35-,36-,37+,38+,39+,40-,41-,42-/m0/s1

> <INCHI_KEY>
ZSWUFDUOFUXWEE-DXZSBXLRSA-M

> <FORMULA>
C48H58N3O31

> <MOLECULAR_WEIGHT>
1172.983

> <EXACT_MASS>
1172.30597568

> <JCHEM_ACCEPTOR_COUNT>
32

> <JCHEM_ATOM_COUNT>
140

> <JCHEM_AVERAGE_POLARIZABILITY>
107.65168875487116

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
22

> <JCHEM_FORMAL_CHARGE>
-1

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-{[(2S)-1-[(2S)-3-[(2S)-2-carboxy-2-[({2,3-dihydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}(hydroxy)methylidene)amino]ethoxy]-2-[({2,3-dihydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}(hydroxy)methylidene)amino]-3-oxopropoxy]-3-hydroxy-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}-2-hydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]benzen-1-olate

> <JCHEM_LOGP>
-4.213400734666664

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
6.438932182767835

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.8174408241118156

> <JCHEM_PKA_STRONGEST_BASIC>
-6.339658279837761

> <JCHEM_POLAR_SURFACE_AREA>
602.5600000000003

> <JCHEM_REFRACTIVITY>
272.83720000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
22

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
3-{[(2S)-1-[(2S)-3-[(2S)-2-carboxy-2-[({2,3-dihydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}(hydroxy)methylidene)amino]ethoxy]-2-[({2,3-dihydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}(hydroxy)methylidene)amino]-3-oxopropoxy]-3-hydroxy-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}-2-hydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]benzenolate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-JUN-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-JUN-22         0                                  
HETATM    1  C   UNK     0      -8.002   7.700   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      10.669   3.080   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.000  -1.540   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0     -10.669   7.700   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.003   5.390   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334  -3.850   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -5.335   1.540   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -6.668  13.090   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      14.670  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.001   3.850   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.334   3.850   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -9.336   8.470   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      12.003   3.850   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.000  -3.080   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -8.002   6.160   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.336   3.850   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -5.335   3.080   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.335   3.080   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       0.000   3.080   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0     -10.669   6.160   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      10.669   6.160   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -8.002  12.320   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      14.670   0.770   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -4.001  -3.850   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -9.336   5.390   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       9.336   5.390   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       2.667  -1.540   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -9.336  13.090   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      16.004   1.540   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -4.001  -5.390   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0     -10.669  12.320   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      16.004   3.080   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      -2.667  -6.160   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0     -10.669  10.780   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      14.670   3.850   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      -1.334  -5.390   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      -9.336  10.010   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      13.337   3.080   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      -1.334  -3.850   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      -6.668   5.390   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       8.002   3.080   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       1.334   0.770   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      -4.001   3.850   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM   49  N   UNK     0      -6.668   3.850   0.000  0.00  0.00           N+0
HETATM   50  N   UNK     0       6.668   3.850   0.000  0.00  0.00           N+0
HETATM   51  N   UNK     0      -0.000   1.540   0.000  0.00  0.00           N+0
HETATM   52  O   UNK     0      -4.001   0.770   0.000  0.00  0.00           O+0
HETATM   53  O   UNK     0      -6.668  14.630   0.000  0.00  0.00           O+0
HETATM   54  O   UNK     0      16.004  -1.540   0.000  0.00  0.00           O+0
HETATM   55  O   UNK     0      -5.335  -1.540   0.000  0.00  0.00           O+0
HETATM   56  O   UNK     0     -12.003   5.390   0.000  0.00  0.00           O-1
HETATM   57  O   UNK     0      10.669   7.700   0.000  0.00  0.00           O+0
HETATM   58  O   UNK     0       4.001  -3.850   0.000  0.00  0.00           O+0
HETATM   59  O   UNK     0      -9.336   3.850   0.000  0.00  0.00           O+0
HETATM   60  O   UNK     0       8.002   6.160   0.000  0.00  0.00           O+0
HETATM   61  O   UNK     0       4.001  -0.770   0.000  0.00  0.00           O+0
HETATM   62  O   UNK     0      -9.336  14.630   0.000  0.00  0.00           O+0
HETATM   63  O   UNK     0      17.338   0.770   0.000  0.00  0.00           O+0
HETATM   64  O   UNK     0      -5.335  -6.160   0.000  0.00  0.00           O+0
HETATM   65  O   UNK     0     -12.003  13.090   0.000  0.00  0.00           O+0
HETATM   66  O   UNK     0      17.338   3.850   0.000  0.00  0.00           O+0
HETATM   67  O   UNK     0      -2.667  -7.700   0.000  0.00  0.00           O+0
HETATM   68  O   UNK     0     -12.003  10.010   0.000  0.00  0.00           O+0
HETATM   69  O   UNK     0      14.670   5.390   0.000  0.00  0.00           O+0
HETATM   70  O   UNK     0      -0.000  -6.160   0.000  0.00  0.00           O+0
HETATM   71  O   UNK     0      -5.335   6.160   0.000  0.00  0.00           O+0
HETATM   72  O   UNK     0       8.002   1.540   0.000  0.00  0.00           O+0
HETATM   73  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   74  O   UNK     0       6.668   0.770   0.000  0.00  0.00           O+0
HETATM   75  O   UNK     0       4.001   0.770   0.000  0.00  0.00           O+0
HETATM   76  O   UNK     0      -4.001   5.390   0.000  0.00  0.00           O+0
HETATM   77  O   UNK     0       1.334   5.390   0.000  0.00  0.00           O+0
HETATM   78  O   UNK     0       2.667   3.080   0.000  0.00  0.00           O+0
HETATM   79  O   UNK     0      -2.667   3.080   0.000  0.00  0.00           O+0
HETATM   80  O   UNK     0      -8.002  10.780   0.000  0.00  0.00           O+0
HETATM   81  O   UNK     0      13.337   1.540   0.000  0.00  0.00           O+0
HETATM   82  O   UNK     0      -2.667  -3.080   0.000  0.00  0.00           O+0
HETATM   83  H   UNK     0      -4.001   2.310   0.000  0.00  0.00           H+0
HETATM   84  H   UNK     0       4.001   2.310   0.000  0.00  0.00           H+0
HETATM   85  H   UNK     0       0.000   4.620   0.000  0.00  0.00           H+0
HETATM   86  H   UNK     0      -8.002  13.860   0.000  0.00  0.00           H+0
HETATM   87  H   UNK     0      16.004   0.000   0.000  0.00  0.00           H+0
HETATM   88  H   UNK     0      -5.335  -4.620   0.000  0.00  0.00           H+0
HETATM   89  H   UNK     0     -10.669  13.860   0.000  0.00  0.00           H+0
HETATM   90  H   UNK     0      17.338   2.310   0.000  0.00  0.00           H+0
HETATM   91  H   UNK     0      -4.001  -6.930   0.000  0.00  0.00           H+0
HETATM   92  H   UNK     0     -12.003  11.550   0.000  0.00  0.00           H+0
HETATM   93  H   UNK     0      14.670   2.310   0.000  0.00  0.00           H+0
HETATM   94  H   UNK     0      -2.667  -4.620   0.000  0.00  0.00           H+0
HETATM   95  H   UNK     0      -9.336  11.550   0.000  0.00  0.00           H+0
HETATM   96  H   UNK     0      16.004   4.620   0.000  0.00  0.00           H+0
HETATM   97  H   UNK     0      -1.334  -6.930   0.000  0.00  0.00           H+0
HETATM   98  H   UNK     0     -10.669   9.240   0.000  0.00  0.00           H+0
HETATM   99  H   UNK     0      13.337   4.620   0.000  0.00  0.00           H+0
HETATM  100  H   UNK     0      -0.000  -4.620   0.000  0.00  0.00           H+0
CONECT    1   13   16                                                       
CONECT    2   14   17                                                       
CONECT    3   15   18                                                       
CONECT    4   13   22                                                       
CONECT    5   14   23                                                       
CONECT    6   15   24                                                       
CONECT    7   19   52                                                       
CONECT    8   25   53                                                       
CONECT    9   26   54                                                       
CONECT   10   27   55                                                       
CONECT   11   20   78                                                       
CONECT   12   21   79                                                       
CONECT   13    1    4   40                                                  
CONECT   14    2    5   41                                                  
CONECT   15    3    6   42                                                  
CONECT   16    1   28   43                                                  
CONECT   17    2   29   44                                                  
CONECT   18    3   30   45                                                  
CONECT   19    7   47   49   83                                             
CONECT   20   11   46   50   84                                             
CONECT   21   12   48   51   85                                             
CONECT   22    4   28   56                                                  
CONECT   23    5   29   57                                                  
CONECT   24    6   30   58                                                  
CONECT   25    8   31   80   86                                             
CONECT   26    9   32   81   87                                             
CONECT   27   10   33   82   88                                             
CONECT   28   16   22   59                                                  
CONECT   29   17   23   60                                                  
CONECT   30   18   24   61                                                  
CONECT   31   25   34   62   89                                             
CONECT   32   26   35   63   90                                             
CONECT   33   27   36   64   91                                             
CONECT   34   31   37   65   92                                             
CONECT   35   32   38   66   93                                             
CONECT   36   33   39   67   94                                             
CONECT   37   34   40   68   95                                             
CONECT   38   35   41   69   96                                             
CONECT   39   36   42   70   97                                             
CONECT   40   13   37   80   98                                             
CONECT   41   14   38   81   99                                             
CONECT   42   15   39   82  100                                             
CONECT   43   16   49   71                                                  
CONECT   44   17   50   72                                                  
CONECT   45   18   51   73                                                  
CONECT   46   20   74   75                                                  
CONECT   47   19   76   79                                                  
CONECT   48   21   77   78                                                  
CONECT   49   19   43                                                       
CONECT   50   20   44                                                       
CONECT   51   21   45                                                       
CONECT   52    7                                                            
CONECT   53    8                                                            
CONECT   54    9                                                            
CONECT   55   10                                                            
CONECT   56   22                                                            
CONECT   57   23                                                            
CONECT   58   24                                                            
CONECT   59   28                                                            
CONECT   60   29                                                            
CONECT   61   30                                                            
CONECT   62   31                                                            
CONECT   63   32                                                            
CONECT   64   33                                                            
CONECT   65   34                                                            
CONECT   66   35                                                            
CONECT   67   36                                                            
CONECT   68   37                                                            
CONECT   69   38                                                            
CONECT   70   39                                                            
CONECT   71   43                                                            
CONECT   72   44                                                            
CONECT   73   45                                                            
CONECT   74   46                                                            
CONECT   75   46                                                            
CONECT   76   47                                                            
CONECT   77   48                                                            
CONECT   78   11   48                                                       
CONECT   79   12   47                                                       
CONECT   80   25   40                                                       
CONECT   81   26   41                                                       
CONECT   82   27   42                                                       
CONECT   83   19                                                            
CONECT   84   20                                                            
CONECT   85   21                                                            
CONECT   86   25                                                            
CONECT   87   26                                                            
CONECT   88   27                                                            
CONECT   89   31                                                            
CONECT   90   32                                                            
CONECT   91   33                                                            
CONECT   92   34                                                            
CONECT   93   35                                                            
CONECT   94   36                                                            
CONECT   95   37                                                            
CONECT   96   38                                                            
CONECT   97   39                                                            
CONECT   98   40                                                            
CONECT   99   41                                                            
CONECT  100   42                                                            
MASTER        0    0    0    0    0    0    0    0  100    0  210    0
END

Synonyms

Not Available

Molecular Formula

C₄₈H₅₈N₃O₃₁

Average Mass

1172.983

Monoisotopic Mass

1172.30597568

IUPAC Name

3-{[(2S)-1-[(2S)-3-[(2S)-2-carboxy-2-[({2,3-dihydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}(hydroxy)methylidene)amino]ethoxy]-2-[({2,3-dihydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}(hydroxy)methylidene)amino]-3-oxopropoxy]-3-hydroxy-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}-2-hydroxy-5-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]benzen-1-olate

Traditional Name

CAS Registry Number

Not Available

SMILES

[H][C@@](CO)(N=C(O)C1=C(O)C([O-])=CC(=C1)[C@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(=O)OC[C@]([H])(N=C(O)C1=C(O)C(O)=CC(=C1)[C@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(=O)OC[C@]([H])(N=C(O)C1=C(O)C(O)=CC(=C1)[C@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(O)=O

InChI Identifier

InChI=1S/C48H59N3O31/c52-7-19(49-43(71)16-1-13(4-22(56)28(16)59)40-37(68)34(65)31(62)25(8-53)80-40)47(76)79-12-21(51-45(73)18-3-15(6-24(58)30(18)61)42-39(70)36(67)33(64)27(10-55)82-42)48(77)78-11-20(46(74)75)50-44(72)17-2-14(5-23(57)29(17)60)41-38(69)35(66)32(63)26(9-54)81-41/h1-6,19-21,25-27,31-42,52-70H,7-12H2,(H,49,71)(H,50,72)(H,51,73)(H,74,75)/p-1/t19-,20-,21-,25+,26+,27+,31+,32+,33+,34-,35-,36-,37+,38+,39+,40-,41-,42-/m0/s1

InChI Key

ZSWUFDUOFUXWEE-DXZSBXLRSA-M

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as glycodepsipeptides. Glycodepsipeptides are compounds in which a carbohydrate component is linked to a depsipeptide component.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Depsipeptides

Direct Parent

Glycodepsipeptides

Alternative Parents

Substituents

Glycodepsipeptide
Phenolic glycoside
N-acyl-alpha amino acid or derivatives
N-acyl-alpha-amino acid
Alpha-amino acid ester
Serine or derivatives
Glycosyl compound
C-glycosyl compound
Alpha-amino acid or derivatives
Tricarboxylic acid or derivatives
Catechol
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenoxide
Phenol
Beta-hydroxy acid
Benzenoid
Oxane
Monosaccharide
Hydroxy acid
Monocyclic benzene moiety
Secondary alcohol
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Polyol
Ether
Dialkyl ether
Carboxylic acid
Carboxylic acid derivative
Carboximidic acid derivative
Carboximidic acid
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Organonitrogen compound
Carbonyl group
Alcohol
Organic anion
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
logP	-4.2	ChemAxon
pKa (Strongest Acidic)	2.82	ChemAxon
pKa (Strongest Basic)	-6.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	32	ChemAxon
Hydrogen Donor Count	22	ChemAxon
Polar Surface Area	602.56 Å²	ChemAxon
Rotatable Bond Count	22	ChemAxon
Refractivity	272.84 m³·mol⁻¹	ChemAxon
Polarizability	107.65 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Chromatographic Retention Times and Retention Indices

Retention Times

Not Available

Retention Indices

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Microbial Pathways

Pathways

Not Available

Metabolic Reactions

Reactions

This table shows at most 20 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	1	Human ; Human feces

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

135398090

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

CMMC Knowledgebase

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for [N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]3 (MMDBc0055094)

MOL for #<Metabolite:0x00007f124192ee10>

3D MOL for #<Metabolite:0x00007f124192ee10>

3D SDF for #<Metabolite:0x00007f124192ee10>

3D-SDF for #<Metabolite:0x00007f124192ee10>

PDB for #<Metabolite:0x00007f124192ee10>

3D PDB for #<Metabolite:0x00007f124192ee10>

SMILES for #<Metabolite:0x00007f124192ee10>

INCHI for #<Metabolite:0x00007f124192ee10>

Structure for #<Metabolite:0x00007f124192ee10>

3D Structure for #<Metabolite:0x00007f124192ee10>