MiMeDB: Showing metabocard for N(2)-(1-hydroxy-2-oxoethyl)-GDP (MMDBc0056169)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2022-06-17 20:18:39 UTC

Update Date

2022-08-12 20:09:36 UTC

MiMeDB ID

MMDBc0056169

Metabolite Identification

Common Name

N(2)-(1-hydroxy-2-oxoethyl)-GDP

Description

Structure

MOL SDF PDB SMILES InChI

Synonyms

Not Available

Chemical Formula

C₁₂H₁₄N₅O₁₃P₂

Average Molecular Weight

498.215

Monoisotopic Molecular Weight

498.007980267

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

InChI=1S/C12H17N5O13P2/c18-1-5(19)14-12-15-9-6(10(22)16-12)13-3-17(9)11-8(21)7(20)4(29-11)2-28-32(26,27)30-31(23,24)25/h1,3-5,7-8,11,19-21H,2H2,(H,26,27)(H2,23,24,25)(H2,14,15,16,22)/p-3/t4-,5?,7-,8-,11-/m1/s1

InChI Key

QDSKEQBPIYYJRK-VXSOYKKHSA-K

Chemical Taxonomy

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Proteins

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Related Health Condition	Evidence Type	Measured in Matrix	Data Source	Reference

Microbial Sources

Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
	Proteobacteria	28	Human
	Firmicutes	14	Human ; Cattle

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference	Details

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

Not Available

References

Synthesis Reference

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for N(2)-(1-hydroxy-2-oxoethyl)-GDP (MMDBc0056169)

MOL for #<Metabolite:0x000055b76df95b80>

3D MOL for #<Metabolite:0x000055b76df95b80>

3D SDF for #<Metabolite:0x000055b76df95b80>

3D-SDF for #<Metabolite:0x000055b76df95b80>

PDB for #<Metabolite:0x000055b76df95b80>

3D PDB for #<Metabolite:0x000055b76df95b80>

SMILES for #<Metabolite:0x000055b76df95b80>

INCHI for #<Metabolite:0x000055b76df95b80>

Structure for #<Metabolite:0x000055b76df95b80>

3D Structure for #<Metabolite:0x000055b76df95b80>