| MMDBm0000093 | Blautia obeum A2-162 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000108 | Clostridioides difficile | Not Available | Firmicutes | Human Feces | Microbial culture | Not Available |
| MMDBm0000125 | Clostridium clostridioforme CM201 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000132 | Clostridium perfringens ATCC 13124 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000143 | Coprococcus catus GD/7 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000157 | Enterococcus hirae ATCC 9790 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000172 | Eubacterium limosum KIST612 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000173 | Eubacterium rectale ATCC 33656 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000175 | Eubacterium rectale M104/1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000176 | Eubacterium siraeum 70/3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000203 | Lactobacillus hilgardii | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000207 | Lactobacillus reuteri | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000257 | Roseburia hominis A2-183 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000265 | Ruminococcus sp. SR1/5 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000490 | Erysipelatoclostridium ramosum | Not Available | Firmicutes | Human Feces | Microbial culture | Not Available |
| MMDBm0000492 | Lactobacillus buchneri | Not Available | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0000627 | Clostridium scindens | Not Available | Firmicutes | Not Available | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0000649 | Blautia producta | Not Available | Firmicutes | Human Feces | Microbial culture | Not Available |
| MMDBm0000658 | Lactobacillus johnsonii | Not Available | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0000793 | Clostridium hiranonis | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001069 | Lactobacillus acidophilus | Not Available | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0001125 | Subdoligranulum | Not Available | Firmicutes | Not Available | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001139 | Phascolarctobacterium succinatutens | Not Available | Firmicutes | Not Available | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001156 | Lachnospiraceae bacterium 5_1_63FAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
