| MMDBm0000024 | Bacillus altitudinis 41KF2b | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000025 | Bacillus amyloliquefaciens subsp. amyloliquefaciens DC-12 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000027 | Bacillus cytotoxicus NVH 391-98 | Not Available | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000032 | Bacillus timonensis 10403023 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000033 | Bacillus vallismortis DV1-F-3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000094 | Blautia obeum ATCC 29174 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000112 | Clostridioides difficile R20291 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000120 | Clostridium botulinum A str. ATCC 19397 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000121 | Clostridium botulinum Bf | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000122 | Clostridium botulinum F str. 230613 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000132 | Clostridium perfringens ATCC 13124 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000147 | Dorea formicigenerans ATCC 27755 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000153 | Enterococcus faecalis | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000157 | Enterococcus hirae ATCC 9790 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000173 | Eubacterium rectale ATCC 33656 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000181 | Faecalibacterium prausnitzii SL3/3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000187 | Gemella sanguinis ATCC700632 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000213 | Leuconostoc citreum KM20 | Not Available | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000226 | Paenibacillus alvei DSM 29 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000287 | Veillonella parvula DSM 2008 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000460 | Bacillus anthracis | Not Available | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000464 | Bacillus mycoides | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0000633 | Staphylococcus capitis | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001035 | Bacillus cereus | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
