| MMDBm0000116 | Clostridium beijerinckii NCIMB 8052 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000120 | Clostridium botulinum A str. ATCC 19397 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000121 | Clostridium botulinum Bf | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000122 | Clostridium botulinum F str. 230613 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000136 | Clostridium saccharoperbutylacetonicum N1-4(HMT) | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000143 | Coprococcus catus GD/7 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000153 | Enterococcus faecalis | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000157 | Enterococcus hirae ATCC 9790 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000173 | Eubacterium rectale ATCC 33656 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000175 | Eubacterium rectale M104/1 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000176 | Eubacterium siraeum 70/3 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000201 | Lactobacillus brevis | Not Available | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000227 | Paenibacillus barengoltzii G22 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000257 | Roseburia hominis A2-183 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000402 | Selenomonas ruminantium | Not Available | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0000448 | Streptococcus ratti | Not Available | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0000464 | Bacillus mycoides | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001052 | Clostridium saccharoperbutylacetonicum | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001105 | Ruminococcus callidus | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001146 | Clostridiales bacterium 1_7_47FAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001156 | Lachnospiraceae bacterium 5_1_63FAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001160 | Ruminococcus sp. 5_1_39BFAA | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001264 | Bacillus cereus G9842 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001459 | Clostridium botulinum A str. ATCC 3502 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
