MiMeDB: Parastagonospora nodorum SN15 (MMDBm0015195)

Microbe Identification

Microbe name

Parastagonospora nodorum SN15

NCBI Taxonomy ID

321614

Microbe Taxonomy

Superkingdom

Eukaryota

Kingdom

Eukaryota

Phylum

Ascomycota

Class

Dothideomycetes

Order

Pleosporales

Family

Phaeosphaeriaceae

Genus

Parastagonospora

Species

nodorum

Strain

NULL

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen requirements

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012884	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012978	Cyanate	Carbon dioxide	Cyanate hydratase	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0013053	Phosphate	Adenine	S-methyl-5'-thioadenosine phosphorylase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0013078	D-Mannitol	D-Fructose	Mannitol dehydrogenase DSF1	Dehydrogenation	RHEA	34755880
MMDBr0013170	Adenosine monophosphate	ADP	Adenylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013179	Adenosine triphosphate	ADP	Replicase large subunit	ATP hydrolysis; Dehydratase; Dephosphorylation; Gyrase; Nucleic acid synthesis and/or repair; Nucleic acid unzipping and/or repair; Primase; Replicase; Terminase	RHEA	34755880
MMDBr0013187	Adenosine triphosphate	Shikimate 3-phosphate	Pentafunctional AROM polypeptide	Phosphorylation	RHEA	34755880
MMDBr0013286	1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one	3-Methylthiopropionic acid	Acireductone dioxygenase	Oxygenation	RHEA	34755880
MMDBr0013437	5-Methylthioribulose 1-phosphate	5-(methylsulfanyl)-2,3-dioxopentyl phosphate	Probable bifunctional methylthioribose-1-phosphate isomerase/methylthioribulose-1-phosphate dehydratase	Dehydratase; Isomerization	RHEA	34755880
MMDBr0013458	Guanosine triphosphate	Guanosine diphosphate	Adenylosuccinate synthetase	Synthesis	RHEA	34755880
MMDBr0013570	Water	2-Aminobenzoic acid	Kynureninase	Kynureninase	RHEA	34755880
MMDBr0013681	NADP(+)	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013729	Adenosine triphosphate	Adenosine phosphosulfate	Sulfate adenylyltransferase subunit 2	Adenylyltransferase; Phosphorylation	RHEA	34755880
MMDBr0013829	(6S)-NADHX	ADP	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	Dehydratase	RHEA	34755880
MMDBr0013906	Mannitol 1-phosphate	beta-D-Fructose 6-phosphate	Mannitol-1-phosphate 5-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013908	Guanosine triphosphate	Guanosine diphosphate	GTPase ArgK	Dephosphorylation; GTP hydrolysis; Intramolecular transfer of functional group; Nucleic acid synthesis and/or repair; Phytase	RHEA	34755880
MMDBr0013978	Hydrogen peroxide	Water	Bromoperoxidase-catalase	Catalase; Dimerase; Peroxidation; Synthesis	RHEA	34755880
MMDBr0014001	Hydrogen Ion	L-3-Hydroxykynurenine	Kynurenine 3-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Dehydratase; Dehydroquinase	RHEA	34755880
MMDBr0014083	Shikimate 3-phosphate	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Pentafunctional AROM polypeptide	Carboxyvinyltransferase	RHEA	34755880
MMDBr0014160	3-deoxy-D-arabino-heptulosonate-7-phosphate	3-Dehydroquinate	Pentafunctional AROM polypeptide	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0014216	S-(Hydroxymethyl)glutathione	Formaldehyde	Putative glutathione-dependent formaldehyde-activating enzyme		RHEA	34755880
MMDBr0014436	Acetyl-CoA	CoA	Amino-acid acetyltransferase	Acetyltransferase	RHEA	34755880
MMDBr0014459	1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one	4-methylsulfanyl-2-oxobutanoic acid	Acireductone dioxygenase	Oxygenation	RHEA	34755880
MMDBr0014507	ADP-D-ribose 1''-phosphate	ADP-D-ribose	ADP-ribose 1''-phosphate phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014517	L-3-Hydroxykynurenine	3-Hydroxyanthranilic acid	Kynureninase	Kynureninase	RHEA	34755880
MMDBr0014816	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014817	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014848	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014849	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014909	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014910	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0015120	(6R)-NADHX	(6S)-NADHX	Bifunctional NAD(P)H-hydrate repair enzyme Nnr	Epimerization	RHEA	34755880
MMDBr0015121	Lycopene	≈í‚â•-Carotene	Lycopene beta-cyclase	Cycle formation	RHEA	34755880
MMDBr0015125	(6R)-NADPHX	(6S)-NADPHX	Bifunctional NAD(P)H-hydrate repair enzyme Nnr	Epimerization	RHEA	34755880
MMDBr0015126	(6S)-NADPHX	ADP	ATP-dependent (S)-NAD(P)H-hydrate dehydratase	Dehydratase	RHEA	34755880
MMDBr0015129	≈í‚â•-Carotene	beta-Carotene	Lycopene beta-cyclase	Cycle formation	RHEA	34755880
MMDBr0015348	(2E,6E,10E)-geranylgeranyl diphosphate	15-cis-phytoene	Bifunctional protein CrtB/UppS	Cycle formation; Synthesis	RHEA	34755880
MMDBr0016254	Iron(3+)	Fe2+	NADH-cytochrome b5 reductase 2	Reduction	RHEA	34755880
MMDBr0017144	dehydroprobetaenone I	Betaenone C	Cytochrome P450 monooxygenase bet2	Oxygenation	RHEA	34755880
MMDBr0017145	dehydroprobetaenone I	Betaenone C	Cytochrome P450 monooxygenase bet2	Oxygenation	RHEA	34755880
MMDBr0017146	dehydroprobetaenone I	epoxybetaenone	Cytochrome P450 monooxygenase bet2	Oxygenation	RHEA	34755880
MMDBr0017147	dehydroprobetaenone I	epoxybetaenone	Cytochrome P450 monooxygenase bet2	Oxygenation	RHEA	34755880
MMDBr0017148	Betaenone C	betaenone A	FAD-linked oxidoreductase orf1	Redox reaction	RHEA	34755880
MMDBr0017149	Betaenone C	betaenone A	FAD-linked oxidoreductase orf1	Redox reaction	RHEA	34755880
MMDBr0017150	betaenone A	Water	Cytochrome P450 monooxygenase sthD	Oxygenation	RHEA	34755880
MMDBr0017151	betaenone A	Water	Cytochrome P450 monooxygenase sthD	Oxygenation	RHEA	34755880
MMDBr0017269	Betaenone C	Water	Cytochrome P450 monooxygenase sthD	Oxygenation	RHEA	34755880
MMDBr0017270	Betaenone C	Water	Cytochrome P450 monooxygenase sthD	Oxygenation	RHEA	34755880
MMDBr0017271	Stemphyloxin I	stemphyloxin II	FAD-linked oxidoreductase sthB	Redox reaction	RHEA	34755880
MMDBr0017272	Stemphyloxin I	stemphyloxin II	FAD-linked oxidoreductase sthB	Redox reaction	RHEA	34755880
MMDBr0017273	Hydrogen Ion	betaenone B	Cytochrome P450 monooxygenase sthF	Oxygenation	RHEA	34755880
MMDBr0017274	Hydrogen Ion	betaenone B	Cytochrome P450 monooxygenase sthF	Oxygenation	RHEA	34755880
MMDBr0017316	Acetyl-CoA	Carbon dioxide	Non-reducing polyketide synthase CTB1	Synthesis	RHEA	34755880
MMDBr0017317	Acetyl-CoA	Carbon dioxide	Non-reducing polyketide synthase CTB1	Synthesis	RHEA	34755880
MMDBr0017318	nor-toralactone	Hydrogen Ion	Dual O-methyltransferase/FAD-dependent monooxygenase CTB3	Methylation	RHEA	34755880
MMDBr0017319	nor-toralactone	Hydrogen Ion	Dual O-methyltransferase/FAD-dependent monooxygenase CTB3	Methylation	RHEA	34755880
MMDBr0017320	Hydrogen Ion	1-(3,4,5-trihydroxy-7-methoxynaphthalen-2-yl)propan-2-one	Dual O-methyltransferase/FAD-dependent monooxygenase CTB3	Methylation	RHEA	34755880
MMDBr0017321	Hydrogen Ion	1-(3,4,5-trihydroxy-7-methoxynaphthalen-2-yl)propan-2-one	Dual O-methyltransferase/FAD-dependent monooxygenase CTB3	Methylation	RHEA	34755880
MMDBr0017843	Adenosine triphosphate	Adenosine monophosphate	GMP synthase [glutamine-hydrolyzing]		RHEA	34755880
MMDBr0017882	Adenosine triphosphate	ADP	Carbamoyl-phosphate synthase small chain		RHEA	34755880
MMDBr0024343	Adenosine triphosphate	Hydrogen Ion	Serine/threonine-protein kinase ssn3		RHEA	34755880
MMDBr0024370	S-Adenosylmethionine	Hydrogen Ion	Phosphatidylethanolamine N-methyltransferase		RHEA	34755880
MMDBr0024539	Hydrogen Ion	5'-Deoxyadenosine	Lipoyl synthase		RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein		RHEA	34755880
MMDBr0024720	Uridine diphosphate glucose	Hydrogen Ion	Sterol 3-beta-glucosyltransferase		RHEA	34755880
MMDBr0024809	Water	Hydrogen Ion	Molybdopterin synthase catalytic subunit		RHEA	34755880
MMDBr0024967	S-Adenosylmethionine	Hydrogen Ion	tRNA (guanine(37)-N1)-methyltransferase Trm5b		RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase		RHEA	34755880
MMDBr0025071	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine-N(7)-)-methyltransferase		RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein		RHEA	34755880
MMDBr0025305	NADP(+)	Hydrogen Ion	Very-long-chain 3-oxoacyl-CoA reductase		RHEA	34755880
MMDBr0025390	Hydrogen Ion	Water	Trans-enoyl reductase bet3		RHEA	34755880
MMDBr0025391	Hydrogen Ion	Water	Trans-enoyl reductase bet3		RHEA	34755880
MMDBr0025452	NADP(+)	Hydrogen Ion	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025453	Hydrogen Ion	NADP(+)	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025454	NAD	Hydrogen Ion	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025455	Hydrogen Ion	NAD	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025573	L-Cysteine	Water	Thiamine thiazole synthase		RHEA	34755880
MMDBr0025761	dehydroprobetaenone I	probetaenone I	Short-chain dehydrogenase/reductase bet4		RHEA	34755880
MMDBr0025762	dehydroprobetaenone I	probetaenone I	Short-chain dehydrogenase/reductase bet4		RHEA	34755880
MMDBr0025764	Betaenone C	betaenone B	Short-chain dehydrogenase/reductase sthC		RHEA	34755880
MMDBr0025765	Betaenone C	betaenone B	Short-chain dehydrogenase/reductase sthC		RHEA	34755880
MMDBr0025851	S-Adenosylmethionine	Hydrogen Ion	Histone-lysine N-methyltransferase set9		RHEA	34755880
MMDBr0026034	Water	Guanosine 2'-phosphate	2',3'-cyclic-nucleotide 3'-phosphodiesterase	Formation of 2'-nucleotide products from 2',3'-cyclic substrates	RHEA	34755880
MMDBr0026035	Water	Cytidine 2'-monophosphate	2',3'-cyclic-nucleotide 3'-phosphodiesterase	Formation of 2'-nucleotide products from 2',3'-cyclic substrates	RHEA	34755880
MMDBr0026036	Water	Adenosine 2'-phosphate	2',3'-cyclic-nucleotide 3'-phosphodiesterase	Formation of 2'-nucleotide products from 2',3'-cyclic substrates	RHEA	34755880
MMDBr0026037	Water	Uridine 2'-monophosphate	2',3'-cyclic-nucleotide 3'-phosphodiesterase	Formation of 2'-nucleotide products from 2',3'-cyclic substrates	RHEA	34755880
MMDBr0026065	Cytidine triphosphate	Cytidine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026066	Uridine triphosphate	Uridine 5'-monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026067	Adenosine triphosphate	Adenosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026068	Guanosine triphosphate	Guanosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026069	Cytidine triphosphate	Cytidine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026070	Uridine triphosphate	Uridine 5'-monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026071	Adenosine triphosphate	Adenosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026072	Guanosine triphosphate	Guanosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026089	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026090	Deoxycytidine 5'-triphosphate	2'-Deoxycytidine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026091	Deoxyadenosine triphosphate	Deoxyadenosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026092	2'-Deoxyguanosine 5'-triphosphate	2'-Deoxyguanosine 5'-monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026093	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026094	Deoxycytidine 5'-triphosphate	2'-Deoxycytidine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026095	Deoxyadenosine triphosphate	Deoxyadenosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026096	2'-Deoxyguanosine 5'-triphosphate	2'-Deoxyguanosine 5'-monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank