| MMDBm0000026 | Bacillus cereus AH187 (F4810/72) | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000094 | Blautia obeum ATCC 29174 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000097 | Brevibacillus brevis NBRC 100599 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000108 | Clostridioides difficile | Not Available | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000109 | Clostridioides difficile 630 | Not Available | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000112 | Clostridioides difficile R20291 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000120 | Clostridium botulinum A str. ATCC 19397 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0000121 | Clostridium botulinum Bf | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000122 | Clostridium botulinum F str. 230613 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000138 | Clostridium sporogenes | Not Available | Firmicutes | Human Vaginal secretion | Microbial culture | Not Available |
| MMDBm0000157 | Enterococcus hirae ATCC 9790 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000187 | Gemella sanguinis ATCC700632 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000237 | Peptostreptococcus anaerobius | Not Available | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0000464 | Bacillus mycoides | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0000471 | Virgibacillus halodenitrificans | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0000793 | Clostridium hiranonis | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001027 | Acetoanaerobium sticklandii | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0001035 | Bacillus cereus | Not Available | Firmicutes | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001077 | Paraclostridium bifermentans | Not Available | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0001264 | Bacillus cereus G9842 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001459 | Clostridium botulinum A str. ATCC 3502 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001460 | Clostridium botulinum A str. Hall | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001470 | Clostridium difficile CD196 | Not Available | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001473 | Clostridium sticklandii DSM 519 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001794 | Lysinibacillus sphaericus C3-41 | Not Available | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
