MiMeDB: Aspergillus oryzae RIB40 (MMDBm0028980)

Microbe Identification

Microbe name

Aspergillus oryzae RIB40

NCBI Taxonomy ID

510516

Microbe Taxonomy

Superkingdom

Eukaryota

Kingdom

Eukaryota

Phylum

Ascomycota

Class

Eurotiomycetes

Order

Eurotiales

Family

Aspergillaceae

Genus

Aspergillus

Species

oryzae

Strain

Aspergillus RIB40

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen requirements

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012860	(2R)-2-phosphoglyceric acid	Water	Enolase	Enolization	RHEA	34755880
MMDBr0012884	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012885	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase B	Dehydrogenation	RHEA	34755880
MMDBr0012960	Adenosine triphosphate	ADP	Probable D-xylulose kinase A	Phosphorylation	RHEA	34755880
MMDBr0012978	Cyanate	Carbon dioxide	Cyanate hydratase	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0013026	Hydrogen Ion	Carbon dioxide	Orotidine 5'-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013045	Alpha-D-glucose 6-phosphate	beta-D-Fructose 6-phosphate	Glucose-6-phosphate isomerase	Isomerization	RHEA	34755880
MMDBr0013078	D-Mannitol	D-Fructose	Mannitol dehydrogenase DSF1	Dehydrogenation	RHEA	34755880
MMDBr0013170	Adenosine monophosphate	ADP	Adenylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013179	Adenosine triphosphate	ADP	Replicase large subunit	ATP hydrolysis; Dehydratase; Dephosphorylation; Gyrase; Nucleic acid synthesis and/or repair; Nucleic acid unzipping and/or repair; Primase; Replicase; Terminase	RHEA	34755880
MMDBr0013187	Adenosine triphosphate	Shikimate 3-phosphate	Pentafunctional AROM polypeptide	Phosphorylation	RHEA	34755880
MMDBr0013307	Adenosine triphosphate	ADP	Bifunctional riboflavin kinase/FMN adenylyltransferase	Phosphorylation	RHEA	34755880
MMDBr0013347	beta-D-Fructose 1,6-bisphosphate	D-Glyceraldehyde 3-phosphate	Fructose-bisphosphate aldolase	Aldol addition (or reverse)	RHEA	34755880
MMDBr0013357	(2R)-3-phosphoglyceric acid	(2R)-3-phospho-glyceroyl phosphate	Phosphoglycerate kinase	Phosphorylation	RHEA	34755880
MMDBr0013386	Acetic acid	Acetyl-CoA	Acetate--CoA ligase [ADP-forming]	Ligation	RHEA	34755880
MMDBr0013387	Acetic acid	Acetyl-CoA	Acyl-CoA ligase ppsA	Ligation	RHEA	34755880
MMDBr0013404	alpha-D-mannose 1-phosphate	diphosphate	Alginate biosynthesis protein AlgA	Guanyltransferase; Guanylyltransferase	RHEA	34755880
MMDBr0013416	L-Glutamic acid	Ornithine	Arginine biosynthesis bifunctional protein ArgJ	Acetyltransferase	RHEA	34755880
MMDBr0013432	(1R,2S)-homoisocitrate	cis-homoaconitate	Probable methanogen homoaconitase large subunit	Homoaconitase	RHEA	34755880
MMDBr0013437	5-Methylthioribulose 1-phosphate	5-(methylsulfanyl)-2,3-dioxopentyl phosphate	Probable bifunctional methylthioribose-1-phosphate isomerase/methylthioribulose-1-phosphate dehydratase	Dehydratase; Isomerization	RHEA	34755880
MMDBr0013458	Guanosine triphosphate	Guanosine diphosphate	Adenylosuccinate synthetase	Synthesis	RHEA	34755880
MMDBr0013495	Adenosine triphosphate	ADP	ATP-dependent 6-phosphofructokinase	Phosphofructokinase	RHEA	34755880
MMDBr0013524	digallate	Gallic acid	Tannase		RHEA	34755880
MMDBr0013570	Water	2-Aminobenzoic acid	Kynureninase	Kynureninase	RHEA	34755880
MMDBr0013681	NADP(+)	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013706	3-Hydroxyanthranilic acid	(2Z,4Z)-2-amino-3-carboxymuconic acid 6-semialdehyde	3-hydroxyanthranilate 3,4-dioxygenase	Oxygenation	RHEA	34755880
MMDBr0013729	Adenosine triphosphate	Adenosine phosphosulfate	Sulfate adenylyltransferase subunit 2	Adenylyltransferase; Phosphorylation	RHEA	34755880
MMDBr0013784	D-Glyceraldehyde 3-phosphate	Dihydroxyacetone phosphate	Bifunctional PGK/TIM	Isomerization	RHEA	34755880
MMDBr0013906	Mannitol 1-phosphate	beta-D-Fructose 6-phosphate	Mannitol-1-phosphate 5-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013908	Guanosine triphosphate	Guanosine diphosphate	GTPase ArgK	Dephosphorylation; GTP hydrolysis; Intramolecular transfer of functional group; Nucleic acid synthesis and/or repair; Phytase	RHEA	34755880
MMDBr0013939	NADP(+)	Hydrogen Ion	Alcohol dehydrogenase class-3	Dehydrogenation	RHEA	34755880
MMDBr0013940	NAD	Hydrogen Ion	Alcohol dehydrogenase class-3	Dehydrogenation	RHEA	34755880
MMDBr0013941	S-Methyl-5-thio-alpha-D-ribose 1-phosphate	5-Methylthioribulose 1-phosphate	5-deoxyribose 1-phosphate isomerase	Isomerization	RHEA	34755880
MMDBr0013978	Hydrogen peroxide	Water	Bromoperoxidase-catalase	Catalase; Dimerase; Peroxidation; Synthesis	RHEA	34755880
MMDBr0013979	Hydrogen peroxide	Water	Catalase B	Catalase	RHEA	34755880
MMDBr0013983	Adenosine triphosphate	Adenosine monophosphate	4-hydroxybutyrate--CoA ligase 1	Ligation	RHEA	34755880
MMDBr0013984	Adenosine triphosphate	Adenosine monophosphate	Acyl-CoA ligase ppsA	Ligation	RHEA	34755880
MMDBr0013991	NAD	D-Xylulose	Sorbitol dehydrogenase	Dehydrogenation; Reduction	RHEA	34755880
MMDBr0013992	NAD	D-Xylulose	D-xylulose reductase A	Reduction	RHEA	34755880
MMDBr0014001	Hydrogen Ion	L-3-Hydroxykynurenine	Kynurenine 3-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0014015	4-chlorophenylacetonitrile	4-chlorophenylacetic acid	Arylacetonitrilase	Arylacetonitrilase	RHEA	34755880
MMDBr0014021	Hydrogen Ion	Hydrogen peroxide	Methanobactin mb-OB3b	Dismutation	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Dehydratase; Dehydroquinase	RHEA	34755880
MMDBr0014083	Shikimate 3-phosphate	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Pentafunctional AROM polypeptide	Carboxyvinyltransferase	RHEA	34755880
MMDBr0014109	2,3-Dihydroxybenzoate	Pyrocatechol	2,3-dihydroxybenzoate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0014160	3-deoxy-D-arabino-heptulosonate-7-phosphate	3-Dehydroquinate	Pentafunctional AROM polypeptide	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0014216	S-(Hydroxymethyl)glutathione	Formaldehyde	Putative glutathione-dependent formaldehyde-activating enzyme		RHEA	34755880
MMDBr0014351	Glucose 1-phosphate	Alpha-D-glucose 6-phosphate	Phosphomannomutase/phosphoglucomutase	Intramolecular transfer of functional group; Phosphoglucomutase; Phosphomannomutase	RHEA	34755880
MMDBr0014367	Adenine	Hypoxanthine	Adenine deaminase	Deamination	RHEA	34755880
MMDBr0014408	NADPH	Hydrogen Ion	Bifunctional cytochrome P450/NADPH--P450 reductase ALT2	Reduction	RHEA	34755880
MMDBr0014436	Acetyl-CoA	CoA	Amino-acid acetyltransferase	Acetyltransferase	RHEA	34755880
MMDBr0014507	ADP-D-ribose 1''-phosphate	ADP-D-ribose	ADP-ribose 1''-phosphate phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014517	L-3-Hydroxykynurenine	3-Hydroxyanthranilic acid	Kynureninase	Kynureninase	RHEA	34755880
MMDBr0014683	NAD	D-Xylose	Probable NAD(P)H-dependent D-xylose reductase xyl1	Reduction	RHEA	34755880
MMDBr0014684	NADP(+)	D-Xylose	Probable NAD(P)H-dependent D-xylose reductase xyl1	Reduction	RHEA	34755880
MMDBr0014816	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014817	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014848	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014849	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014909	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0014910	Water	diphosphate	Inosine triphosphate pyrophosphatase	Pyrophosphatase	RHEA	34755880
MMDBr0015121	Lycopene	≈í‚â•-Carotene	Lycopene beta-cyclase	Cycle formation	RHEA	34755880
MMDBr0015129	≈í‚â•-Carotene	beta-Carotene	Lycopene beta-cyclase	Cycle formation	RHEA	34755880
MMDBr0015330	L-Dopa	Water	Polyphenol oxidase 1	Oxidation; Tyrosinase	RHEA	34755880
MMDBr0015348	(2E,6E,10E)-geranylgeranyl diphosphate	15-cis-phytoene	Bifunctional protein CrtB/UppS	Cycle formation; Synthesis	RHEA	34755880
MMDBr0015792	Ornithine	Water	L-ornithine N(5)-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0015793	Ornithine	Water	L-ornithine N(5)-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0016113	Acetamide	Acetic acid	Acetamidase	Acetamidase	RHEA	34755880
MMDBr0016134	Hydrogen Ion	Acetaldehyde	Pyruvate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0016254	Iron(3+)	Fe2+	NADH-cytochrome b5 reductase 2	Reduction	RHEA	34755880
MMDBr0017162	(R)-miconazole	(R)-miconazole	ABC multidrug transporter atrA		RHEA	34755880
MMDBr0017163	(R)-miconazole	(R)-miconazole	ABC multidrug transporter atrA		RHEA	34755880
MMDBr0017843	Adenosine triphosphate	Adenosine monophosphate	GMP synthase [glutamine-hydrolyzing]		RHEA	34755880
MMDBr0017874	Water	L-Glutamic acid	Thermolabile glutaminase		RHEA	34755880
MMDBr0017881	L-Tyrosine	Water	Polyphenol oxidase 1		RHEA	34755880
MMDBr0017882	Adenosine triphosphate	ADP	Carbamoyl-phosphate synthase small chain		RHEA	34755880
MMDBr0024343	Adenosine triphosphate	Hydrogen Ion	Serine/threonine-protein kinase ssn3		RHEA	34755880
MMDBr0024346	NAD	Hydrogen Ion	Enoyl-[acyl-carrier-protein] reductase [NADH]		RHEA	34755880
MMDBr0024370	S-Adenosylmethionine	Hydrogen Ion	Phosphatidylethanolamine N-methyltransferase		RHEA	34755880
MMDBr0024484	beta-cyclopiazonate	alpha-cyclopiazonate	Beta-cyclopiazonate dehydrogenase		RHEA	34755880
MMDBr0024539	Hydrogen Ion	5'-Deoxyadenosine	Lipoyl synthase		RHEA	34755880
MMDBr0024549	Water	Phosphate	3-phytase		RHEA	34755880
MMDBr0024553	Oxygen	Water	Bifunctional cytochrome P450/NADPH--P450 reductase 2		RHEA	34755880
MMDBr0024563	NADP(+)	Hydrogen Ion	3-oxoacyl-[acyl-carrier-protein] reductase MabA		RHEA	34755880
MMDBr0024568	Water	Hydrogen Ion	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C		RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein		RHEA	34755880
MMDBr0024701	Acetyl-CoA	Hydrogen Ion	Histone acetyltransferase rtt109		RHEA	34755880
MMDBr0024702	Acetyl-CoA	Hydrogen Ion	Histone acetyltransferase rtt109		RHEA	34755880
MMDBr0024720	Uridine diphosphate glucose	Hydrogen Ion	Sterol 3-beta-glucosyltransferase		RHEA	34755880
MMDBr0024723	Hydrogen Ion	Water	Fatty acid synthase beta subunit pkiC		RHEA	34755880
MMDBr0024771	2-hydroxyisobutanoyl-CoA	Hydrogen Ion	tRNA(Met) cytidine acetyltransferase TmcA		RHEA	34755880
MMDBr0024772	2-hydroxyisobutanoyl-CoA	Hydrogen Ion	tRNA(Met) cytidine acetyltransferase TmcA		RHEA	34755880
MMDBr0024809	Water	Hydrogen Ion	Molybdopterin synthase catalytic subunit		RHEA	34755880
MMDBr0024964	L-Cysteine	CoA	Palmitoyltransferase pfa3		RHEA	34755880
MMDBr0024968	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA wybutosine-synthesizing protein 4		RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase		RHEA	34755880
MMDBr0024978	Carbon dioxide	Hydrogen Ion	tRNA wybutosine-synthesizing protein 4		RHEA	34755880
MMDBr0025015	Acetyl-CoA	CoA	Fatty acid synthase beta subunit pkiC		RHEA	34755880
MMDBr0025016	Malonyl-CoA	CoA	Malonyl CoA-acyl carrier protein transacylase		RHEA	34755880
MMDBr0025065	molybdenum cofactor	Water	Molybdenum cofactor sulfurase		RHEA	34755880
MMDBr0025071	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine-N(7)-)-methyltransferase		RHEA	34755880
MMDBr0025120	S-Adenosylmethionine	Hydrogen Ion	tRNA (uracil-O(2)-)-methyltransferase		RHEA	34755880
MMDBr0025127	S-Adenosylmethionine	Hydrogen Ion	tRNA (adenine(58)-N(1))-methyltransferase TrmI		RHEA	34755880
MMDBr0025153	Hydrogen Ion	diphosphate	Molybdopterin-synthase adenylyltransferase		RHEA	34755880
MMDBr0025209	Acetyl-CoA	Hydrogen Ion	N-acetyltransferase Eis		RHEA	34755880
MMDBr0025210	Acetyl-CoA	Hydrogen Ion	Histone acetyltransferase rtt109		RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein		RHEA	34755880
MMDBr0025305	NADP(+)	Hydrogen Ion	Very-long-chain 3-oxoacyl-CoA reductase		RHEA	34755880
MMDBr0025452	NADP(+)	Hydrogen Ion	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025453	Hydrogen Ion	NADP(+)	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025454	NAD	Hydrogen Ion	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025455	Hydrogen Ion	NAD	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]		RHEA	34755880
MMDBr0025470	Crotonoyl-CoA	Hydrogen Ion	Histone acetyltransferase esa1		RHEA	34755880
MMDBr0025471	Crotonoyl-CoA	Hydrogen Ion	Histone acetyltransferase esa1		RHEA	34755880
MMDBr0025573	L-Cysteine	Water	Thiamine thiazole synthase		RHEA	34755880
MMDBr0025719	S-Adenosylmethionine	Hydrogen Ion	Histone-lysine N-methyltransferase, H3 lysine-4 specific		RHEA	34755880
MMDBr0025726	S-Adenosylmethionine	Hydrogen Ion	Histone-lysine N-methyltransferase, H3 lysine-36 specific		RHEA	34755880
MMDBr0025727	S-Adenosylmethionine	Hydrogen Ion	Histone-lysine N-methyltransferase, H3 lysine-79 specific		RHEA	34755880
MMDBr0025730	L-Methionine	S-Adenosylhomocysteine	Secondary metabolism regulator LAE1		RHEA	34755880
MMDBr0025731	L-Methionine	S-Adenosylhomocysteine	Secondary metabolism regulator LAE1		RHEA	34755880
MMDBr0025851	S-Adenosylmethionine	Hydrogen Ion	Histone-lysine N-methyltransferase set9		RHEA	34755880
MMDBr0025945	S-Adenosylmethionine	S-Adenosylhomocysteine	mRNA cap guanine-N7 methyltransferase		RHEA	34755880
MMDBr0026065	Cytidine triphosphate	Cytidine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026066	Uridine triphosphate	Uridine 5'-monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026067	Adenosine triphosphate	Adenosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026068	Guanosine triphosphate	Guanosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026069	Cytidine triphosphate	Cytidine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026070	Uridine triphosphate	Uridine 5'-monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026071	Adenosine triphosphate	Adenosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026072	Guanosine triphosphate	Guanosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026089	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026090	Deoxycytidine 5'-triphosphate	2'-Deoxycytidine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026091	Deoxyadenosine triphosphate	Deoxyadenosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026092	2'-Deoxyguanosine 5'-triphosphate	2'-Deoxyguanosine 5'-monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026093	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026094	Deoxycytidine 5'-triphosphate	2'-Deoxycytidine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026095	Deoxyadenosine triphosphate	Deoxyadenosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026096	2'-Deoxyguanosine 5'-triphosphate	2'-Deoxyguanosine 5'-monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank